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  1. gitter-lab/metl gitter-lab/metl Public

    Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language models

    Python 22 2

  2. Reed-CompBio/spras Reed-CompBio/spras Public

    Signaling Pathway Reconstruction Analysis Streamliner (SPRAS)

    Python 10 20

  3. single-cell-pseudotime single-cell-pseudotime Public

    An overview of algorithms for estimating pseudotime in single-cell RNA-seq data

    387 60

  4. manubot/rootstock manubot/rootstock Public

    Clone me to create your Manubot manuscript

    HTML 443 167

  5. gitter-lab/ssps gitter-lab/ssps Public

    Sparse Signaling Pathway Sampling: MCMC for signaling pathway inference

    Julia 14

  6. gitter-lab/nn4dms gitter-lab/nn4dms Public

    Neural networks for deep mutational scanning data

    Jupyter Notebook 62 16