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  1. An overview of algorithms for estimating pseudotime in single-cell RNA-seq data

    262 50

  2. Gene regulatory network reconstruction from pseudotemporal single-cell gene expression data

    MATLAB 7 5

  3. Clone me to create your Manubot manuscript

    HTML 332 127

  4. Jupyter notebooks demonstrating a microscopy machine learning image analysis workflow

    Jupyter Notebook 6

  5. Sparse Signaling Pathway Sampling: MCMC for signaling pathway inference

    Julia 13

  6. Neural networks for deep mutational scanning data

    Jupyter Notebook 14 3

1,577 contributions in the last year

Sep Oct Nov Dec Jan Feb Mar Apr May Jun Jul Aug Sep Mon Wed Fri

Contribution activity

September 2021

Created a pull request in greenelab/covid19-review that received 12 comments

Add figures to methods and edit text

Closes #1026 Add figures from #944 and #1034 There are several changes to automated statistics, new figures, and a manual reference that will need …

+81 −51 12 comments
Opened 4 other pull requests in 2 repositories

Created an issue in greenelab/covid19-review that received 29 comments

Overview figure for methods manuscript

I attempted to sketch an overview figure to summarize some of the automation in this project and how GitHub is used. It's pretty complex. That make…

Opened 2 other issues in 2 repositories
carpentries-incubator/ml4bio-workshop 1 open
greenelab/covid19-review 1 open
1 contribution in private repositories Sep 3

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