sync combined repertoire test data

airr-community · Apr 8, 2024 · b9c4795 · b9c4795
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commit b9c4795
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diff --git a/lang/R/tests/data-tests/good_combined_airr.json b/lang/R/tests/data-tests/good_combined_airr.json
@@ -189,6 +189,7 @@
                         "label": "naive B cell"
                     },
                     "cell_phenotype": "expression of CD20 and the absence of CD27",
+                    "cell_label": "naive B cell",
                     "cell_species": {
                         "id": "NCBITAXON:9606",
                         "label": "Homo sapiens"
@@ -388,6 +389,7 @@
                         "label": "memory B cell"
                     },
                     "cell_phenotype": "expression of CD20 and CD27",
+                    "cell_label": "memory B cell",
                     "cell_species": {
                         "id": "NCBITAXON:9606",
                         "label": "Homo sapiens"
@@ -587,6 +589,7 @@
                         "label": "naive thymus-derived CD4-positive, alpha-beta T cell"
                     },
                     "cell_phenotype": "expression of CD8 and absence of CD4 and CD45RO",
+                    "cell_label": "naive CD4+ aB T cell",
                     "cell_species": {
                         "id": "NCBITAXON:9606",
                         "label": "Homo sapiens"

diff --git a/lang/R/tests/data-tests/good_combined_airr.yaml b/lang/R/tests/data-tests/good_combined_airr.yaml
@@ -145,6 +145,7 @@ Repertoire:
         cell_species:
           id: NCBITAXON:9606
           label: Homo sapiens
+        cell_label: naive B cell
         single_cell: false
         cell_isolation: FACS
         template_class: RNA
@@ -307,6 +308,7 @@ Repertoire:
           id: CL:0000787
           label: memory B cell
         cell_phenotype: expression of CD20 and CD27
+        cell_label: memory B cell
         cell_species:
           id: NCBITAXON:9606
           label: Homo sapiens
@@ -472,6 +474,7 @@ Repertoire:
           id: CL:0000895
           label: naive thymus-derived CD4-positive, alpha-beta T cell
         cell_phenotype: expression of CD8 and absence of CD4 and CD45RO
+        cell_label: naive CD4+ aB T cell
         cell_species:
           id: NCBITAXON:9606
           label: Homo sapiens

diff --git a/lang/python/tests/data/good_combined_airr.json b/lang/python/tests/data/good_combined_airr.json
@@ -189,6 +189,7 @@
                         "label": "naive B cell"
                     },
                     "cell_phenotype": "expression of CD20 and the absence of CD27",
+                    "cell_label": "naive B cell",
                     "cell_species": {
                         "id": "NCBITAXON:9606",
                         "label": "Homo sapiens"
@@ -388,6 +389,7 @@
                         "label": "memory B cell"
                     },
                     "cell_phenotype": "expression of CD20 and CD27",
+                    "cell_label": "memory B cell",
                     "cell_species": {
                         "id": "NCBITAXON:9606",
                         "label": "Homo sapiens"
@@ -587,6 +589,7 @@
                         "label": "naive thymus-derived CD4-positive, alpha-beta T cell"
                     },
                     "cell_phenotype": "expression of CD8 and absence of CD4 and CD45RO",
+                    "cell_label": "naive CD4+ aB T cell",
                     "cell_species": {
                         "id": "NCBITAXON:9606",
                         "label": "Homo sapiens"

diff --git a/lang/python/tests/data/good_combined_airr.yaml b/lang/python/tests/data/good_combined_airr.yaml
@@ -145,6 +145,7 @@ Repertoire:
         cell_species:
           id: NCBITAXON:9606
           label: Homo sapiens
+        cell_label: naive B cell
         single_cell: false
         cell_isolation: FACS
         template_class: RNA
@@ -307,6 +308,7 @@ Repertoire:
           id: CL:0000787
           label: memory B cell
         cell_phenotype: expression of CD20 and CD27
+        cell_label: memory B cell
         cell_species:
           id: NCBITAXON:9606
           label: Homo sapiens
@@ -472,6 +474,7 @@ Repertoire:
           id: CL:0000895
           label: naive thymus-derived CD4-positive, alpha-beta T cell
         cell_phenotype: expression of CD8 and absence of CD4 and CD45RO
+        cell_label: naive CD4+ aB T cell
         cell_species:
           id: NCBITAXON:9606
           label: Homo sapiens