Associated with publication (Weber & Pillow 2017), this repository contains Matlab code for:
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generating simulated neural responses that reproduce a variety of dynamic spiking behaviors using the Izhikevich neuron model [2,3].
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fitting a Poisson generalized linear model (GLM) to neural responses.
To get started, open demo_glm_fitting_and_simulation.m.
fit_glm.m is the main function used to fit a Poisson GLM to data.
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Weber, A.I. & Pillow, J.W. Capturing the dynamical repertoire of single neurons with generalized linear models. Neural Computation, 2017 29(12):3260-3289 link.
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Izhikevich, E. M. Simple model of spiking neurons. IEEE Trans Neural Netw, 2003 (14): 1569-1572.
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Izhikevich, E. M. Which model to use for cortical spiking neurons? IEEE Trans Neural Netw 2004 (15): 1063-1070.