Beta of 1.8

New Features

A column was added to peptide output files to show sequences with flanking N and C terminal residues.

--exclude, --add, --regex, and --toLower options were added to allow user to include or exclude proteins which contain a specified string, or match a regular expression from output files.

-f <prefix> will now be interpreted as a regular expression.

-mw option will now also calculate molecular formulas for peptides in additional to monoisotopic and average masses.

DTsetup, a program which automatically sets up DTASelect-Filter files for being processed by DTarray_pro is now included with DTarray_pro

Bug fixes

Fixed an error in molFormula.cpp where failed residue mass lookups were not properly handled.

Fixing error with -rev option where reverse peptides were left in output files.

Fixing compiler error pleiades.

Additional under the hood improvements to code.