iPS Proteomics

A code repository to reproduce Fig. 2B.

Requirements

• Unix OS (Linux, WSL, macOS)
• R language (> version 3.5)

Execute

Rscript --vanilla --slave scripts/dotplot.R

The command produces a reports directory, which contains the followings:

• dotplot_log2fc.png: Fig. 2B
• dotplot_log2fc.pdf: Fig. 2B
• expression_log2fc.csv: Gene expression data to generate Fig. 2B