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  1. mCaller mCaller Public

    A python program to call methylation (m6A in DNA) from nanopore signal data

    Python 43 16

  2. CovFuzze CovFuzze Public

    Script for plotting coverage and peaks for multiple replicates

    Python 9 3

  3. DEQ DEQ Public

    An R package to conveniently run DESeq2, edgeR, and QNB for the detection of differential methylation in MeRIP/m6A-seq data.

    R 10 6

  4. merip_reanalysis_scripts merip_reanalysis_scripts Public

    Scripts for paper entitled "Limits in the detection of m6A changes using MeRIP/m6A-seq

    R 45 31