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  • Utrecht University
  • Utrecht
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  1. FastDeMe FastDeMe Public

    A fast, easy solution for metagenomic data analysis - Forked from Sander Vermeulens repository, developed during his internship

    Python 6 2

  2. cgmlst cgmlst Public

    Fork of mlst of tseemann modified for cgmlst. Not very fast when used with organisms with a large number of allelic variants

    Perl 6 2

  3. RFPlasmid RFPlasmid Public

    Predicting plasmid contigs from assemblies using single copy marker genes, plasmid genes, kmers - Developed by Linda van der Graaf

    Python 42 7

  4. Microbial-Genomics-2022 Microbial-Genomics-2022 Public

    https://aldertzomer.github.io/Microbial-Genomics-2022/ Day 4 and 5 of the Microbial Genomics course 2022

    Python 6 3

  5. vibrio_parahaemolyticus_genomoserotyping vibrio_parahaemolyticus_genomoserotyping Public

    Kaptive database of O and K antigen clusters of Vibrio parahaemolyticus

    7 1

  6. MolecularEpidemiology_AnalysisWGS MolecularEpidemiology_AnalysisWGS Public

    Forked from aschuerch/MolecularEpidemiology_AnalysisWGS

    Python