feat: add matplotlib notebook

docs/conf.py

@@ -23,7 +23,7 @@
 from pathlib import Path
 import m2r
 
-sys.path.insert(0, os.path.abspath('..'))
+sys.path.insert(0, os.path.abspath(".."))
 
 from version import VERSION, RELEASE  # noqa
 
@@ -73,39 +73,39 @@ def export_md_in_rst(frad, export_subdir="docs"):
 
 # If your documentation needs a minimal Sphinx version, state it here.
 #
-# needs_sphinx = '1.0'
+# needs_sphinx = "1.0"
 
 # Add any Sphinx extension module names here, as strings. They can be
-# extensions coming with Sphinx (named 'sphinx.ext.*') or your custom
+# extensions coming with Sphinx (named "sphinx.ext.*") or your custom
 # ones.
 extensions = [
-    'sphinx.ext.autodoc',
-    'sphinx.ext.viewcode',
-    'sphinx.ext.napoleon',
-    'readthedocs_ext.readthedocs',
-    'recommonmark',
+    "sphinx.ext.autodoc",
+    "sphinx.ext.viewcode",
+    "sphinx.ext.napoleon",
+    "readthedocs_ext.readthedocs",
+    "recommonmark",
 ]
 
 # Add any paths that contain templates here, relative to this directory.
-templates_path = ['.templates']
+templates_path = [".templates"]
 
 # The suffix(es) of source filenames.
 # You can specify multiple suffix as a list of string:
 #
-# source_suffix = ['.rst', '.md']
+# source_suffix = [".rst", ".md"]
 source_suffix = {
-    '.rst': 'restructuredtext',
-    '.txt': 'markdown',
-    '.md': 'markdown',
+    ".rst": "restructuredtext",
+    ".txt": "markdown",
+    ".md": "markdown",
 }
 
 # The master toctree document.
-master_doc = 'index'
+master_doc = "index"
 
 # General information about the project.
-project = 'boar'
-copyright = 'Alexandre Cameron'
-author = 'Alexandre Cameron'
+project = "boar"
+copyright = "Alexandre Cameron"
+author = "Alexandre Cameron"
 
 # The version info for the project you're documenting, acts as replacement for
 # |version| and |release|, also used in various other places throughout the
@@ -126,10 +126,10 @@ def export_md_in_rst(frad, export_subdir="docs"):
 # List of patterns, relative to source directory, that match files and
 # directories to ignore when looking for source files.
 # This patterns also effect to html_static_path and html_extra_path
-exclude_patterns = ['.build', 'Thumbs.db', '.DS_Store']
+exclude_patterns = [".build", "Thumbs.db", ".DS_Store"]
 
 # The name of the Pygments (syntax highlighting) style to use.
-pygments_style = 'sphinx'
+pygments_style = "sphinx"
 
 # If true, `todo` and `todoList` produce output, else they produce nothing.
 todo_include_todos = False
@@ -140,7 +140,7 @@ def export_md_in_rst(frad, export_subdir="docs"):
 # The theme to use for HTML and HTML Help pages.  See the documentation for
 # a list of builtin themes.
 #
-html_theme = 'sphinx_rtd_theme'
+html_theme = "sphinx_rtd_theme"
 
 # Theme options are theme-specific and customize the look and feel of a theme
 # further.  For a list of options available for each theme, see the
@@ -151,32 +151,32 @@ def export_md_in_rst(frad, export_subdir="docs"):
 # Add any paths that contain custom static files (such as style sheets) here,
 # relative to this directory. They are copied after the builtin static files,
 # so a file named "default.css" will overwrite the builtin "default.css".
-html_static_path = ['.static']
+html_static_path = [".static"]
 
 # Custom sidebar templates, must be a dictionary that maps document names
 # to template names.
 #
 # This is required for the alabaster theme
 # refs: http://alabaster.readthedocs.io/en/latest/installation.html#sidebars
 html_sidebars = {
-    '**': [
-        'relations.html',  # needs 'show_related': True theme option to display
-        'searchbox.html',
+    "**": [
+        "relations.html",  # needs "show_related": True theme option to display
+        "searchbox.html",
     ]
 }
 
 
 # -- Options for HTMLHelp output ------------------------------------------
 
 # Output file base name for HTML help builder.
-htmlhelp_basename = 'boardoc'
+htmlhelp_basename = "boardoc"
 
 # -- Options for manual page output ---------------------------------------
 
 # One entry per manual page. List of tuples
 # (source start file, name, description, authors, manual section).
 man_pages = [
-    (master_doc, 'boar', 'boar documentation', [author], 1)
+    (master_doc, "boar", "boar documentation", [author], 1)
 ]
 
 
@@ -186,6 +186,6 @@ def export_md_in_rst(frad, export_subdir="docs"):
 # (source start file, target name, title, author,
 #  dir menu entry, description, category)
 texinfo_documents = [
-    (master_doc, 'boar', 'boar documentation',
-     author, 'boar', 'One line description of project.'),
+    (master_doc, "boar", "boar documentation",
+     author, "boar", "One line description of project."),
 ]

notebook/00-test/Matplotlib.ipynb

@@ -7,6 +7,18 @@
     "# Matplotlib graph"
    ]
   },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "import pip\n",
+    "\n",
+    "pip.main([\"install\", \"numpy\"])\n",
+    "pip.main([\"install\", \"matplotlib\"])"
+   ]
+  },
   {
    "cell_type": "code",
    "execution_count": null,

tests/test_linting_e2e.py

@@ -12,9 +12,9 @@
 @pytest.mark.parametrize("notebook_path,expected_incorrect_lint_files", [
     (Path(Notebook._02.value, "0-execution.ipynb"), []),
     (Notebook._02.value, [
-        'notebook/02-lint/1-execution.ipynb',
-        'notebook/02-lint/level-1/one-execution.ipynb',
-        'notebook/02-lint/unstructured-executions.ipynb',
+        "notebook/02-lint/1-execution.ipynb",
+        "notebook/02-lint/level-1/one-execution.ipynb",
+        "notebook/02-lint/unstructured-executions.ipynb",
      ]),
     (Notebook._00.value, [])
 ])

tests/test_testing_e2e.py

@@ -5,6 +5,7 @@
 from boar.__init__ import Notebook
 
 
+@pytest.mark.filterwarnings("ignore::DeprecationWarning")
 @pytest.mark.e2e
 @pytest.mark.parametrize("notebook_name", [
     "OK.ipynb",

tests/utils/test_parse.py

@@ -131,31 +131,31 @@ def test_remove_output_returns_correct_values(
     file_path = Path(Notebook._02.value, "0-execution.ipynb")
     inline = False
     cells = [
-        {'cell_type': 'code', 'execution_count': None, 'metadata': {},
-         'outputs': [], 'source': ['a = 1\n', 'print(a)']},
-        {'cell_type': 'markdown', 'metadata': {}, 'source': ['---']}]
+        {"cell_type": "code", "execution_count": None, "metadata": {},
+         "outputs": [], "source": ["a = 1\n", "print(a)"]},
+        {"cell_type": "markdown", "metadata": {}, "source": ["---"]}]
     cleaned_cells = [
-        {'cell_type': 'code', 'metadata': {},
-         'source': ['a = 1\n', 'print(a)'], 'execution_count': None, 'outputs': []},
-        {'cell_type': 'markdown', 'metadata': {}, 'source': ['---']}]
+        {"cell_type": "code", "metadata": {},
+         "source": ["a = 1\n", "print(a)"], "execution_count": None, "outputs": []},
+        {"cell_type": "markdown", "metadata": {}, "source": ["---"]}]
     not_cells = {
-        'metadata': {
-            'kernelspec': {
-                'display_name': 'Python 3', 'language': 'python', 'name': 'python3'},
-            'language_info': {
-                'codemirror_mode': {'name': 'ipython', 'version': 3},
-                'file_extension': '.py',
-                'mimetype': 'text/x-python',
-                'name': 'python',
-                'nbconvert_exporter': 'python',
-                'pygments_lexer': 'ipython3',
-                'version': '3.8.0'}
+        "metadata": {
+            "kernelspec": {
+                "display_name": "Python 3", "language": "python", "name": "python3"},
+            "language_info": {
+                "codemirror_mode": {"name": "ipython", "version": 3},
+                "file_extension": ".py",
+                "mimetype": "text/x-python",
+                "name": "python",
+                "nbconvert_exporter": "python",
+                "pygments_lexer": "ipython3",
+                "version": "3.8.0"}
             },
-        'nbformat': 4,
-        'nbformat_minor': 4
+        "nbformat": 4,
+        "nbformat_minor": 4
 
     }
-    expected_cleaned_content = {'cells': cleaned_cells, **not_cells}
+    expected_cleaned_content = {"cells": cleaned_cells, **not_cells}
 
     # Thus
     mock_manager = Mock()
@@ -178,9 +178,9 @@ def test_remove_output_returns_correct_values(
 @pytest.mark.parametrize("cell,expected_cleaned_cell", [
     ({"cell_type": "not_code"}, {"cell_type": "not_code"}),
     ({"cell_type": "code"},
-     {"cell_type": "code", 'execution_count': None, 'outputs': []}),
-    ({"cell_type": "code", 'execution_count': 1, 'outputs': ["a"]},
-     {"cell_type": "code", 'execution_count': None, 'outputs': []}),
+     {"cell_type": "code", "execution_count": None, "outputs": []}),
+    ({"cell_type": "code", "execution_count": 1, "outputs": ["a"]},
+     {"cell_type": "code", "execution_count": None, "outputs": []}),
 ])
 def test_clean_cell_returns_correct_values(
     cell: dict,