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The lastConfiguartion.conf file was of an old version and caused newer pyfrap versions to crash. TODO: - Data structure: - We might want to move away from saving to pickle files. IDEA: - molecule files do not save anymore list of embryos but just list of path to embryo files. - whenever embryo is needed, molecule calls getEmbryo and thus loading file. This also happens user clicks on gui on embryo - Could also include a loadAll option. - GUI integration: - mesh merging - Simulation visualization - Geometry visualization - Multiple plotting functions - Embryo slicing - Simulation to image export - In general when plot command is called, ask if plotting should be done in current axis. - Add plot modifier from PyFDAP - Add additional plotting functions - Move all plotting functionalities in GUI to Plotting MB - In showObjPropsInBar, if array is longer than maxLength, write sth like "array/list of shape" - Get embryo/molecule compression saving running again. - Include 2D geometries, e.g. allow dim setting for custom geometries. - Might be faster in analysis if we load all files at first, put them in common numpy array, apply all image manupulation steps and finally grab ROIs via c=imgs[idxs,:] - pyfrp_gmsh_geometry.ruledSurface should store more than a single lineLoop but rather have a lineLoops list. - Need to add pyfrp_gmsh_geometry.planeSurface class. - Speed-up via trillionos - simulation.showIC via vtk - In GUI, when selecting fnFlatten, we need to make sure that we add slash Additions: Changes: Bugfixes:
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