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Issues list

thoughts on STAR development team on splice/unsplice/ambigiuous reads classification.
#2127 opened Apr 25, 2024 by mortunco
MGI DNBelab snRNA-seq preparation kit
#2126 opened Apr 25, 2024 by ayeTown
why do i get such a small output file for STARsolo?
#2125 opened Apr 25, 2024 by gmnmnm
make STAR error and unable to install gcc using homebrew
#2124 opened Apr 25, 2024 by mahek3012
Feature request for --quantTranscriptomeBan
#2123 opened Apr 25, 2024 by dincarnato
1
Why is there no assigned gene when the sequence can be completely aligned
#2122 opened Apr 25, 2024 by pandh0607
Understanding variants SAM tags
#2121 opened Apr 22, 2024 by Yenaled
Killed at generating Suffix Array index (genomeGenerate)
#2120 opened Apr 22, 2024 by esraaelmligy
Long time genome indexing
#2119 opened Apr 21, 2024 by esraagithub
Long time genome indexing
#2118 opened Apr 21, 2024 by esraagithub
when I tried to generate the gene expression matrix, I can not generate .bam file with STAR 2.7.11b, 2.7.4a and 2.6.1d.
#2117 opened Apr 19, 2024 by ZChen90
1
Indexing the Reference Genome is not done in STAR
#2116 opened Apr 17, 2024 by helenine
1
STAR human GRCH38
#2115 opened Apr 11, 2024 by ZohreJ
The analysis indicators for Smart-seq2 seem abnormal.
#2114 opened Apr 10, 2024 by hai178912522
1
Output SAM file contains only QNAMEs from forward fasta not reversed
#2113 opened Apr 10, 2024 by mirachirkova
1
Interaction between STARsolo and STAR diploid
#2112 opened Apr 8, 2024 by mparker2
3
Reads With Valid Barcodes=zero in STARsolo analysis
#2111 opened Apr 5, 2024 by jfoedfjwofa
3
multi mapping parameters and centromere
#2110 opened Apr 5, 2024 by ptranvan
3
Read Count Discrepancy
#2109 opened Apr 4, 2024 by bshim181
1
Installing STARsolo on M1 mac
#2108 opened Apr 3, 2024 by jfoedfjwofa
2
No Chimeric.out.junction file generated
#2107 opened Apr 3, 2024 by Mirable8me
3
Aligned BAM files have some reads with not its paired mates
#2106 opened Apr 2, 2024 by teryyoung
2
EXITING because of FATAL ERROR: cannot insert junctions on the fly because of strand GstrandBit problem
#2105 opened Apr 1, 2024 by sukhmanpreet33
1
Error building docker image when compiling STAR on Mac M2 chip : error g++: error: unrecognized command-line option '-mavx2'
#2104 opened Mar 29, 2024 by mblanche
Chimeric reads alignment. Some threads take much longer to complete.
#2103 opened Mar 29, 2024 by alexfriman
1
ProTip! Updated in the last three days: updated:>2024-04-22.