Skip to content

alexioso/ARCHS4-Clustering

Repository files navigation

ARCHS4-Clustering

activate virtual environment (ubuntu): source env/bin/activate

Clustering code starting from a UW CS 548 final project with the final goal of laying out a code structure to allow easy cluster analysis on the ARCHS4 gene expression database

Follow along in the notebooks folder if this is your first time viewing this code, or use the src code if you know what you're doing...

TODO:

Implement K-means clustering Implement SPC Bonus Implement Spectral Clustering

Implement variable normalizing transformations

Add status bar for get_data.py

About

No description, website, or topics provided.

Resources

License

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published