see migrating from PyTables 2 to 3, installable by anaconda. There ar…

…e changes in openFile and getNodes
alexlib · Mar 24, 2018 · 5cf008c · 5cf008c
1 parent ab2c8a2
commit 5cf008c
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/flowtracks/io.py b/flowtracks/io.py
@@ -807,8 +807,8 @@ def trajectories_table(fname, first=None, last=None):
     Returns:
     trajects - a list of Trajectory objects, each trimmed to the frame range.
     """
-    outfile = tables.openFile(fname, mode='r')
-    table = outfile.getNode('/particles')
+    outfile = tables.open_file(fname, mode='r')
+    table = outfile.get_node('/particles')
 
     query_string = ('(trajid == trid)')
     if first is not None: