Implementation of abduction-based control of fixed points of Boolean networks (Biane et al, 2019), using Answer-Set Programming
The control predictions can be processed using the algorecell_types library, which eases the display and comparison with other control methods.
conda install -c colomoto pyactonet
- clingo and its Python module
pip install actonet
Documentation is available at https://pyactonet.readthedocs.io.
Examples can be found at:
- Célia Biane
- Jacques Nicolas
- Loïc Paulevé