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Popular repositories

  1. Whelan-scRNA-Esophagus-Dec21 Whelan-scRNA-Esophagus-Dec21 Public

    R scripts for analyses of the murine epithelium at the Whelan Lab

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  2. Whelan_scRNA_Esophagus_May20 Whelan_scRNA_Esophagus_May20 Public

    UMI-Tools, STAR, Subread, Seurat, and Monocle commands for the Whelan Lab scRNA analysis on the murine esophageal epithelium.

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  3. RNA-Seq-Pipelines RNA-Seq-Pipelines Public

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    End to end RNA-Seq tutorial for RSCM with ShortRead, Rsubread, and DESeq2

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  6. Whelan_scRNA_4NQO_Aug20 Whelan_scRNA_4NQO_Aug20 Public

    Code for Whelan Lab's research on the murine esophagus under ESCC, modeled with 4NQO administration