Write converted object and CSG metadata for debugging (celeritas-proj…

…ect#1259)

* Add serialization code for unit proto
* Rename input builder to proto builder
* Add output of proto-universes
* Add callback for writing proto intermediate data
* Add CSG tree debug output
* Discard when proto isn't available
* Write CSG output for unit proto test
* Save unit label and remapped universe IDs to CSG output

scripts/user/orange-csg-to-dot.py

@@ -5,6 +5,7 @@
 """
 Convert an ORANGE CSG JSON representation to a GraphViz input.
 """
+from itertools import count, repeat
 import json
 
 class DoxygenGenerator:
@@ -22,35 +23,50 @@ def __enter__(self):
     def __exit__(self, type, value, traceback):
         self.write("}\n")
 
-    def write_literal(self, i, value):
+    def write_node(self, i, value):
         self.write(f"{i:02d} [label=\"{value}\"];\n")
 
-    def write_node(self, i, value, edges):
-        self.write_literal(i, f"{i}: {value}")
-        for e in edges:
-            self.write(f"{i:02d} -> {e:02d};\n")
+    def write_edge(self, i, e):
+        self.write(f"{i:02d} -> {e:02d};\n")
 
-def process(gen, tree):
-    for (i, node) in enumerate(tree):
+def process(gen, tree, labels):
+    for (i, node, labs) in zip(count(), tree, labels or repeat(None)):
         if isinstance(node, str):
             # True (or false??)
-            gen.write_literal(i, node)
+            gen.write_node(i, node)
             continue
+        label = "\\n".join(labs) if labs else ""
+
         (nodetype, value) = node
         if nodetype == "S":
-            # Surface
-            gen.write_literal(i, f"S{value}")
-        elif nodetype in ("~", "="):
-            # Negated
-            gen.write_node(i, nodetype, [value])
-        else:
+            # Surface (literal)
+            gen.write_node(i, label or f"S{value}")
+            continue
+
+        if label:
+            label += "\\n"
+        label += nodetype
+        gen.write_node(i, label)
+
+        if isinstance(value, list):
             # Joined
-            gen.write_node(i, nodetype, value)
+            for v in value:
+                gen.write_edge(i, v)
+        else:
+            # Aliased/negated
+            gen.write_edge(i, value)
 
-def run(infile, outfile):
+def run(infile, outfile, universe):
     tree = json.load(infile)
+    metadata = None
+    if universe is not None:
+        # Load from a 'proto' debug file
+        csg_unit = tree[universe]
+        tree = csg_unit["tree"]
+        metadata = csg_unit["metadata"]
+
     with DoxygenGenerator(outfile) as gen:
-        process(gen, tree)
+        process(gen, tree, metadata)
 
 def main():
     import argparse
@@ -60,6 +76,8 @@ def main():
     parser.add_argument(
         "input",
         help="Input filename (- for stdin)")
+    parser.add_argument('-u', '--universe', type=int, default=None,
+                        help="Universe ID if a 'proto' debug file")
     parser.add_argument(
         "-o", "--output",
         default=None,
@@ -76,7 +94,7 @@ def main():
     else:
         outfile = open(args.output, 'w')
 
-    run(infile, outfile)
+    run(infile, outfile, args.universe)
 
 if __name__ == "__main__":
     main()

src/corecel/io/JsonPimpl.hh

@@ -62,5 +62,15 @@ void to_json_pimpl(JsonPimpl* jp, T const& self)
 #endif
 }
 
+#if CELERITAS_USE_JSON
+template<class T>
+nlohmann::json json_pimpl_output(T const& self)
+{
+    JsonPimpl jp;
+    self.output(&jp);
+    return std::move(jp.obj);
+}
+#endif
+
 //---------------------------------------------------------------------------//
 }  // namespace celeritas

src/corecel/io/StreamableVariant.hh

@@ -8,6 +8,7 @@
 #pragma once
 
 #include <ostream>
+#include <sstream>
 #include <variant>
 
 #include "corecel/Assert.hh"
@@ -65,5 +66,17 @@ std::ostream& operator<<(std::ostream& os, StreamableVariant<T> const& svar)
     return os;
 }
 
+//---------------------------------------------------------------------------//
+/*!
+ * Save a variant object's value to a string.
+ */
+template<class T>
+std::string to_string(StreamableVariant<T> const& svar)
+{
+    std::ostringstream os;
+    os << svar;
+    return os.str();
+}
+
 //---------------------------------------------------------------------------//
 }  // namespace celeritas

src/orange/CMakeLists.txt

@@ -29,6 +29,7 @@ list(APPEND SOURCES
   orangeinp/CsgTree.cc
   orangeinp/CsgTypes.cc
   orangeinp/CsgTreeUtils.cc
+  orangeinp/InputBuilder.cc
   orangeinp/IntersectRegion.cc
   orangeinp/IntersectSurfaceBuilder.cc
   orangeinp/PolySolid.cc
@@ -40,12 +41,12 @@ list(APPEND SOURCES
   orangeinp/detail/BoundingZone.cc
   orangeinp/detail/BuildIntersectRegion.cc
   orangeinp/detail/CsgUnitBuilder.cc
-  orangeinp/detail/InputBuilder.cc
   orangeinp/detail/InternalSurfaceFlagger.cc
   orangeinp/detail/IntersectSurfaceState.cc
   orangeinp/detail/LocalSurfaceInserter.cc
   orangeinp/detail/NodeSimplifier.cc
   orangeinp/detail/PostfixLogicBuilder.cc
+  orangeinp/detail/ProtoBuilder.cc
   orangeinp/detail/ProtoMap.cc
   orangeinp/detail/SenseEvaluator.cc
   orangeinp/detail/TransformInserter.cc

src/orange/OrangeParams.cc

@@ -24,6 +24,8 @@
 #include "corecel/io/Logger.hh"
 #include "corecel/io/ScopedTimeLog.hh"
 #include "corecel/io/StringUtils.hh"
+#include "corecel/sys/ScopedMem.hh"
+#include "corecel/sys/ScopedProfiling.hh"
 #include "geocel/BoundingBox.hh"
 #include "geocel/GeantGeoUtils.hh"
 
@@ -144,6 +146,12 @@ OrangeParams::OrangeParams(OrangeInput&& input)
 {
     CELER_VALIDATE(input, << "input geometry is incomplete");
 
+    ScopedProfiling profile_this{"finalize-orange-runtime"};
+    ScopedMem record_mem("orange.finalize_runtime");
+    CELER_LOG(debug) << "Merging runtime data"
+                     << (celeritas::device() ? " and copying to GPU" : "");
+    ScopedTimeLog scoped_time;
+
     // Save global bounding box
     bbox_ = [&input] {
         auto& global = input.universes[orange_global_universe.unchecked_get()];

src/orange/OrangeParams.hh

@@ -41,7 +41,7 @@ class OrangeParams final : public GeoParamsSurfaceInterface,
     // Construct from a JSON or GDML file (if JSON or Geant4 are enabled)
     explicit OrangeParams(std::string const& filename);
 
-    // Construct in-memory from Geant4 (not implemented)
+    // Construct in-memory from Geant4
     explicit OrangeParams(G4VPhysicalVolume const*);
 
     // ADVANCED usage: construct from explicit host data

src/orange/g4org/Converter.cc

@@ -9,6 +9,7 @@
 
 #include "corecel/io/Logger.hh"
 #include "geocel/detail/LengthUnits.hh"
+#include "orange/orangeinp/InputBuilder.hh"
 
 #include "PhysicalVolumeConverter.hh"
 #include "ProtoConstructor.hh"
@@ -47,7 +48,7 @@ auto Converter::operator()(arg_type g4world) -> result_type
 {
     CELER_EXPECT(g4world);
 
-    CELER_LOG(debug) << "Converting Geant4 geometry elements";
+    using orangeinp::InputBuilder;
 
     // Convert solids, logical volumes, physical volumes
     PhysicalVolumeConverter::Options options;
@@ -57,14 +58,19 @@ auto Converter::operator()(arg_type g4world) -> result_type
     CELER_VALIDATE(std::holds_alternative<NoTransformation>(world.transform),
                    << "world volume should not have a transformation");
 
-    CELER_LOG(debug) << "Building protos";
     // Convert logical volumes into protos
     auto global_proto = ProtoConstructor{opts_.verbose}(*world.lv);
 
-    CELER_LOG(debug) << "Building universes";
     // Build universes from protos
     result_type result;
-    result.input = build_input(opts_.tol, *global_proto);
+    InputBuilder build_input([&opts = opts_] {
+        InputBuilder::Options ibo;
+        ibo.tol = opts.tol;
+        ibo.proto_output_file = opts.proto_output_file;
+        ibo.debug_output_file = opts.debug_output_file;
+        return ibo;
+    }());
+    result.input = build_input(*global_proto);
     return result;
 }
 

src/orange/g4org/Converter.hh

@@ -7,6 +7,7 @@
 //---------------------------------------------------------------------------//
 #pragma once
 
+#include <functional>
 #include <memory>
 #include <unordered_map>
 
@@ -23,6 +24,12 @@ class G4VPhysicalVolume;
 
 namespace celeritas
 {
+struct OrangeInput;
+namespace orangeinp
+{
+class ProtoInterface;
+}
+
 namespace g4org
 {
 //---------------------------------------------------------------------------//
@@ -55,6 +62,10 @@ class Converter
         bool verbose{false};
         //! Manually specify a tracking/construction tolerance
         Tolerance<> tol;
+        //! Write interpreted geometry to a JSON file
+        std::string proto_output_file;
+        //! Write intermediate debug ouput (CSG construction) to a JSON file
+        std::string debug_output_file;
     };
 
     struct result_type

src/orange/g4org/PhysicalVolumeConverter.cc

@@ -96,7 +96,9 @@ auto PhysicalVolumeConverter::operator()(arg_type g4world) -> result_type
     CELER_EXPECT(g4world.GetTranslation() == G4ThreeVector(0, 0, 0));
 
     ScopedProfiling profile_this{"import-geant-geo"};
-    ScopedMem record_mem("PhysicalVolumeConverter.convert");
+    ScopedMem record_mem("orange.convert-geant");
+
+    CELER_LOG(status) << "Converting Geant4 geometry elements to ORANGE input";
     ScopedTimeLog scoped_time;
 
     // Construct world volume