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heom_amber

Codes for running hierarichal equation of motion. This code is for a simple spin-Boson problem, however the code itself is general. Reproduces figure 5 of Strumpfer Schulten, JCTC 8, 2808 (2012). Help also taken from Chen, Zheng, Shi, Tan, JCP 131, 094502 (2009)

To run, type make (uses gfortran). Run with ./aout. Should take a few seconds. Creates a file rho.out that has the diagonal entries of the density matrix as a function of time.

Let me know if you need any help

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HEOM codes for 2 chromophores with uncoupled baths

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