Skip to content

Commit

Permalink
chore: update ampel url
Browse files Browse the repository at this point in the history
  • Loading branch information
sgibb committed Mar 7, 2024
1 parent 5c6f568 commit a792278
Show file tree
Hide file tree
Showing 7 changed files with 20 additions and 16 deletions.
12 changes: 6 additions & 6 deletions CITATION.cff
Original file line number Diff line number Diff line change
Expand Up @@ -13,12 +13,12 @@ version: 1.0.1
doi: 10.1093/clinchem/hvae001
abstract: The data were collected as part of the AMPEL project (Analysis and Reporting
System for the Improvement of Patient Safety through Real-Time Integration of Laboratory
Findings, \urlhttps://ampel.care). They include administration data, sepsis labels
based on ICD10 codes and laboratory diagnostics from patients admitted to the University
Hospital Leipzig between Januar 2014 and December 2021 and to the University Hospital
Greifswald between Januar 2015 and December 2020, respectively. Additionally it
provides functions to generate a similar dataset from MIMIC-IV (Johnson et al. 2021
\doi10.13026/S6N6-XD98).
Findings, \urlhttp://www.ampel-cdss.com/). They include administration data, sepsis
labels based on ICD10 codes and laboratory diagnostics from patients admitted to
the University Hospital Leipzig between Januar 2014 and December 2021 and to the
University Hospital Greifswald between Januar 2015 and December 2020, respectively.
Additionally it provides functions to generate a similar dataset from MIMIC-IV (Johnson
et al. 2021 \doi10.13026/S6N6-XD98).
authors:
- family-names: Gibb
given-names: Sebastian
Expand Down
6 changes: 3 additions & 3 deletions DESCRIPTION
Original file line number Diff line number Diff line change
Expand Up @@ -2,13 +2,13 @@ Package: sbcdata
Title:
Laboratory Diagnostics from Septic and Non-septic Patients Used
in the AMPEL Project
Version: 1.0.1
Date: 2022-07-28
Version: 1.0.2
Date: 2024-03-07
Description:
The data were collected as part of the AMPEL project
(Analysis and Reporting System for the Improvement of Patient Safety
through Real-Time Integration of Laboratory Findings,
\url{https://ampel.care}).
\url{http://www.ampel-cdss.com/}).
They include administration data, sepsis labels based on ICD10 codes
and laboratory diagnostics from patients admitted to the
University Hospital Leipzig between Januar 2014 and December 2021 and to the
Expand Down
4 changes: 4 additions & 0 deletions NEWS.md
Original file line number Diff line number Diff line change
@@ -1,5 +1,9 @@
# sbcdata 1.0

## Changes 1.0.2

- Update http://www.ampel-cdss.com/ URL.

## Changes 1.0.1

- Fix Flowcharts in vignette.
Expand Down
2 changes: 1 addition & 1 deletion README.md
Original file line number Diff line number Diff line change
Expand Up @@ -20,7 +20,7 @@ remotes::install_github("ampel-leipzig/sbcdata")

## About the data

The data were collected as part of the [AMPEL](https://ampel.care) project
The data were collected as part of the [AMPEL](http://www.ampel-cdss.com/) project
(Analysis and Reporting System for the Improvement of Patient Safety
through Real-Time Integration of Laboratory Findings).
They include administration data, sepsis labels based on ICD10 codes
Expand Down
6 changes: 3 additions & 3 deletions codemeta.json
Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@
"@context": "https://doi.org/10.5063/schema/codemeta-2.0",
"@type": "SoftwareSourceCode",
"identifier": "sbcdata",
"description": " The data were collected as part of the AMPEL project (Analysis and Reporting System for the Improvement of Patient Safety through Real-Time Integration of Laboratory Findings, \\urlhttps://ampel.care). They include administration data, sepsis labels based on ICD10 codes and laboratory diagnostics from patients admitted to the University Hospital Leipzig between Januar 2014 and December 2021 and to the University Hospital Greifswald between Januar 2015 and December 2020, respectively. Additionally it provides functions to generate a similar dataset from MIMIC-IV (Johnson et al. 2021 \\doi10.13026/S6N6-XD98).",
"description": " The data were collected as part of the AMPEL project (Analysis and Reporting System for the Improvement of Patient Safety through Real-Time Integration of Laboratory Findings, \\urlhttp://www.ampel-cdss.com/). They include administration data, sepsis labels based on ICD10 codes and laboratory diagnostics from patients admitted to the University Hospital Leipzig between Januar 2014 and December 2021 and to the University Hospital Greifswald between Januar 2015 and December 2020, respectively. Additionally it provides functions to generate a similar dataset from MIMIC-IV (Johnson et al. 2021 \\doi10.13026/S6N6-XD98).",
"name": "sbcdata: \n Laboratory Diagnostics from Septic and Non-septic Patients Used\n in the AMPEL Project",
"codeRepository": "https://github.com/ampel-leipzig/sbcdata",
"issueTracker": "https://github.com/ampel-leipzig/sbcdata/issues/",
Expand Down Expand Up @@ -202,7 +202,7 @@
},
"SystemRequirements": null
},
"fileSize": "47116.486KB",
"fileSize": "47116.518KB",
"citation": [
{
"@type": "ScholarlyArticle",
Expand Down Expand Up @@ -284,7 +284,7 @@
],
"releaseNotes": "https://github.com/ampel-leipzig/sbcdata/blob/master/NEWS.md",
"readme": "https://github.com/ampel-leipzig/sbcdata/blob/main/README.md",
"contIntegration": ["https://github.com/ampel-leipzig/sbcdata/actions", "https://codecov.io/gh/ampel-leipzig/sbcdata?branch=main"],
"contIntegration": ["https://github.com/ampel-leipzig/sbcdata/actions/workflows/R-CMD-check.yaml", "https://codecov.io/gh/ampel-leipzig/sbcdata?branch=main"],
"developmentStatus": "https://www.repostatus.org/#active",
"keywords": ["data", "sepsis", "r-package", "r-stats", "laboratory"]
}
2 changes: 1 addition & 1 deletion man/sbcdata-package.Rd

Some generated files are not rendered by default. Learn more about how customized files appear on GitHub.

4 changes: 2 additions & 2 deletions vignettes/sbcdata.Rmd
Original file line number Diff line number Diff line change
Expand Up @@ -22,10 +22,10 @@ sbcdata

# Introduction

The data were collected as part of the [AMPEL](https://ampel.care) project
The data were collected as part of the [AMPEL](http://www.ampel-cdss.com/) project
(Analysis and Reporting System for the Improvement of Patient Safety
through Real-Time Integration of Laboratory Findings,
\url{https://ampel.care}).
\url{http://www.ampel-cdss.com/}).
They include administration data, sepsis labels based on ICD10 codes
and laboratory diagnostics from patients admitted to the
University Hospital Leipzig between Januar 2014 and December 2019 and to the
Expand Down

0 comments on commit a792278

Please sign in to comment.