Update literature.py to optionally create tex/bib output (#908)

* Update references in interfaces to use new syntax (start with ADS:(bibcode) or DOI:(doi code))
* Add common bibfile, AMUSE data dir
* When calling an AMUSE script with `--bibtex`, create new files `bib-{scriptname}.bib` and `bib-{scriptname}.tex` that contain all AMUSE references and a ready-to-include TeX snippet.

src/amuse/__init__.py

@@ -26,8 +26,11 @@
 > pydoc amuse.ic
 """
 import sys
+import os
 import numpy
 
+_AMUSE_ROOT = os.path.abspath(os.path.dirname(__file__))
+
 def numpy_fix():
     try:
         numpy.set_printoptions(legacy='1.13')
@@ -56,3 +59,6 @@ def __getattr__(self, attr):
     TrackLiteratureReferences.default()
 except:
     pass
+
+def get_data(path):
+    return os.path.join(_AMUSE_ROOT, 'data', path)

src/amuse/community/aarsethzare/interface.py

@@ -7,8 +7,8 @@ class AarsethZareInterface(CodeInterface, LiteratureReferencesMixIn):
     Aarseth & Zare
 
     The relevant references are:
-        .. [#] Aarseth, S. & Zare, K., 1974, Celestial Mechanics 10, 185 [1974CeMec..10..185A]
-        .. [#] Aarseth, S. & Zare, K., 1974, Celestial Mechanics 10, 516 [1974CeMec..10..516A]
+        .. [#] ADS:1974CeMec..10..185A (Aarseth, S. & Zare, K., 1974, Celestial Mechanics 10, 185)
+        .. [#] ADS:1974CeMec..10..516A (Aarseth, S. & Zare, K., 1974, Celestial Mechanics 10, 516)
     """    
     #include_headers = ['worker_code.h']
 

src/amuse/community/athena/interface.py

@@ -34,12 +34,12 @@ class AthenaInterface(CodeInterface, MagnetohydrodynamicsInterface, LiteratureRe
     different Riemann solvers and spatial reconstruction methods.
     
     The relevant references are:
-        .. [#] Gardiner & Stone 2005, JCP, 205, 509  (2D JCP Method) [2005JCoPh.205..509G]
-        .. [#] Gardiner & Stone 2007, JCP, 227, 4123 (3D JCP Method) [2008JCoPh.227.4123G]
-        .. [#] Stone et al. 2008, ApJS, 178, 137 (Method) [2008ApJS..178..137S]
-        .. [#] Stone & Gardiner 2009, NewA, 14, 139 (van Leer Integrator) [2009NewA...14..139S]
-        .. [#] Skinner & Ostriker 2010, ApJ, 188, 290 (Cylindrical Integrator) [2010ApJS..188..290S]
-        .. [#] Stone & Gardiner 2010, ApJS, 189, 142 (Shearing Box Method) [2010ApJS..189..142S]
+        .. [#] ADS:2005JCoPh.205..509G (Gardiner & Stone 2005, JCP, 205, 509 (2D JCP Method))
+        .. [#] ADS:2008JCoPh.227.4123G (Gardiner & Stone 2007, JCP, 227, 4123 (3D JCP Method))
+        .. [#] ADS:2008ApJS..178..137S (Stone et al. 2008, ApJS, 178, 137 (Method))
+        .. [#] ADS:2009NewA...14..139S (Stone & Gardiner 2009, NewA, 14, 139 (van Leer Integrator))
+        .. [#] ADS:2010ApJS..188..290S (Skinner & Ostriker 2010, ApJ, 188, 290 (Cylindrical Integrator))
+        .. [#] ADS:2010ApJS..189..142S (Stone & Gardiner 2010, ApJS, 189, 142 (Shearing Box Method))
     """
 
     include_headers = ['worker_code.h', 'stopcond.h']

src/amuse/community/bhtree/interface.py

@@ -11,7 +11,7 @@ class BHTreeInterface(
     StoppingConditionInterface,
     SinglePointGravityFieldInterface):
     """
-        .. [#] Barnes, J., Hut, P., A Hierarchical O(N log N) force-calculation algorithm, *Nature*, **4**, 324 (1986) [1986Natur.324..446B]
+        .. [#] ADS:1986Natur.324..446B (Barnes, J., Hut, P., *Nature*, **4**, 324 (1986))
     """
     include_headers = ['interface.h', 'worker_code.h', 'stopcond.h']
 

src/amuse/community/bonsai/interface.py

@@ -13,9 +13,7 @@ class BonsaiInterface(CodeInterface,
                       SinglePointGravityFieldInterface):
 
     """
-        .. [#] Bedorf J., Gaburov E., Portegies Zwart S., "A sparse octree
-        .. [#] gravitational N-body code that runs entirely on the GPU processor",
-        .. [#] 2012, JCoPh, 231, 2825 [2012JCoPh.231.2825B]
+        .. [#] ADS:2012JCoPh.231.2825B (Bedorf J., Gaburov E., Portegies Zwart S., 2012, JCoPh, 231, 2825)
     """
 
     include_headers = ['worker_code.h', 'stopcond.h']

src/amuse/community/bonsai2/interface.py

@@ -5,14 +5,8 @@
 class Bonsai2Interface(CodeInterface, LiteratureReferencesMixIn, GravitationalDynamicsInterface, 
         StoppingConditionInterface, CodeWithDataDirectories):
     """
-        .. [#] Bedorf J., Gaburov E., Fujii M. S., Nitadori K. Ishiyama T., Portegies Zwart S.,
-        ...[#] "24.77 Pflops on a gravitational tree-code to simulate the Milky Way Galaxy
-        ...[#] with 18600 GPUs", 2014, SC'14 proceedings, 54-65 [2014hpcn.conf...54B]
-        ...[#] https://doi.org/10.1109/SC.2014.10
-
-        .. [#] Bedorf J., Gaburov E., Portegies Zwart S., "A sparse octree
-        .. [#] gravitational N-body code that runs entirely on the GPU processor",
-        .. [#] 2012, JCoPh, 231, 2825 [2012JCoPh.231.2825B]
+        .. [#] ADS:2014hpcn.conf...54B (Bedorf J., et al., 2014, SC'14 proceedings, 54-65, https://doi.org/10.1109/SC.2014.10)
+        .. [#] ADS:2012JCoPh.231.2825B (Bedorf J., Gaburov E., Portegies Zwart S., 2012, JCoPh, 231, 2825)
     """
 
     include_headers = ['worker_code.h', 'stopcond.h']

src/amuse/community/brutus/interface.py

@@ -16,7 +16,7 @@ class BrutusInterface(CodeInterface, GravitationalDynamicsInterface, LiteratureR
         StoppingConditionInterface, CodeWithDataDirectories):
     """
     Brutus (Brute force N-body code)
-        .. [#] Boekholt, Tjarda and Portegies Zwart, Simon, On the reliability of N-body simulations, Computational Astrophysics and Cosmology, Volume 2, article id.2, 21 pp. [2015ComAC...2....2B]
+        .. [#] ADS:2015ComAC...2....2B (Boekholt, Tjarda and Portegies Zwart, Simon, Computational Astrophysics and Cosmology, Volume 2, article id.2, 21 pp.)
     
     """
     include_headers = ['worker_code.h', 'stopcond.h']

src/amuse/community/bse/interface.py

@@ -31,12 +31,8 @@ class BSEInterface(CodeInterface, common.CommonCodeInterface , LiteratureReferen
     response of the secondary to accretion and the outcome of any merger events are in 
     place in BSE and the details can be found in the BSE paper:
     
-        .. [#] Hurley J.R., Tout C.A., & Pols O.R., 2002, MNRAS, 329, 897:
-        .. [#] ... Evolution of binary stars and the effect of tides on binary populations
-        .. [#] [2002MNRAS.329..897H]
-        .. [#] Hurley J.R., Pols O.R., Tout C.A., 2000, MNRAS, 315, 543:
-        .. [#] ... Comprehensive analytic formulae for stellar evolution as a function of mass and metallicity
-        .. [#] [2000MNRAS.315..543H]
+        .. [#] ADS:2002MNRAS.329..897H (Hurley J.R., Tout C.A., & Pols O.R., 2002, MNRAS, 329, 897)
+        .. [#] ADS:2000MNRAS.315..543H (Hurley J.R., Pols O.R., Tout C.A., 2000, MNRAS, 315, 543)
     """
     def __init__(self, **options):
         CodeInterface.__init__(self, name_of_the_worker="bse_worker", **options)

src/amuse/community/capreole/interface.py

@@ -1,28 +1,27 @@
 from amuse.community import *
-
-
-
 from amuse.community.interface.hydro import HydrodynamicsInterface
 from amuse.community.interface.common import CommonCode
+from amuse.units.generic_unit_system import *
 
 
-from amuse.units.generic_unit_system import *
 class CapreoleInterface(
-    CodeInterface, 
+    CodeInterface,
     HydrodynamicsInterface,
     StoppingConditionInterface,
     LiteratureReferencesMixIn
-    ):
+):
     """
-    Capreole is a grid-based astrophysical hydrodynamics code developed by Garrelt Mellema. 
-    It works in one, two dimensions, and three spatial dimensions and is programmed in 
-    Fortran 90. It is parallelized with MPI. For the hydrodynamics it relies on the 
-    Roe-Eulderink-Mellema (REM) solver, which is an approximate Riemann solver for arbitrary
-    metrics. It can solve different hydrodynamics problems. Capreole has run on single 
-    processors, but also on massively parallel systems (e.g. 512 processors on a BlueGene/L).
-    
+    Capreole is a grid-based astrophysical hydrodynamics code developed by
+    Garrelt Mellema. It works in one, two dimensions, and three spatial
+    dimensions and is programmed in Fortran 90. It is parallelized with MPI.
+    For the hydrodynamics it relies on the Roe-Eulderink-Mellema (REM) solver,
+    which is an approximate Riemann solver for arbitrary metrics. It can solve
+    different hydrodynamics problems. Capreole has run on single processors,
+    but also on massively parallel systems (e.g. 512 processors on a
+    BlueGene/L).
+
     The reference for Capreole (original version):
-        .. [#] Mellema, Eulderink & Icke 1991, A&A 252, 718 [1991A&A...252..718M]
+        .. [#] ADS:1991A&A...252..718M (Mellema, Eulderink & Icke 1991, A&A 252, 718)
     """
 
 

src/amuse/community/etics/interface.py

@@ -4,9 +4,7 @@
 
 class EticsInterface(CodeInterface, GravitationalDynamicsInterface, LiteratureReferencesMixIn):
     """
-        .. [#] Meiron, Y., Li, B., Holley-Bockelmann, K., & Spurzem, R. 2014, ApJ, 792, 98:
-        .. [#] ... "Expansion techniques for collisionless stellar dynamical simulations"
-        .. [#] [2014ApJ...792...98M]
+        .. [#] ADS:2014ApJ...792...98M (Meiron, Y., Li, B., Holley-Bockelmann, K., & Spurzem, R. 2014, ApJ, 792, 98)
     """
 
     include_headers = ['worker_code.h']

src/amuse/community/evtwin/interface.py

@@ -19,22 +19,30 @@ class EVtwinInterface(CodeInterface, LiteratureReferencesMixIn, StellarEvolution
     The work-around for the helium flash is not yet implemented in the AMUSE
     interface to evtwin. Currently only solar metallicity.
 
-        .. [#] ** Eggleton, P.P. 1971, MNRAS, 151, 351: "The evolution of low mass stars" [1971MNRAS.151..351E]
-        .. [#] ** Glebbeek, Pols & Hurley, 2008 A&A (for enhancements to the solver) [2008A&A...488.1007G]
-        .. [#] Eggleton, P.P. 1972, MNRAS, 156, 361: "Composition changes during stellar evolution" [1972MNRAS.156..361E]
-        .. [#] Eggleton, P.P. 1973, MNRAS, 163, 279: "A numerical treatment of double shell source stars" [1973MNRAS.163..279E]
-        .. [#] Eggleton, P.P., Faulkner, J., & Flannery, B.P. 1973, A&A, 23, 325:
-        .. [#] ... "An Approximate Equation of State for Stellar Material" [1973A&A....23..325E]
-        .. [#] Han, Z., Podsiadlowski, P., & Eggleton, P.P. 1994, MNRAS, 270, 121:
-        .. [#] ... "A Possible Criterion for Envelope Ejection in Asymptotic Giant Branch or First Giant Branch Stars" [1994MNRAS.270..121H]
-        .. [#] Pols, O.R., Tout, C.A., Eggleton, P.P., & Han, Z. 1995, MNRAS, 274, 964:
-        .. [#] ... "Approximate input physics for stellar modelling" [1995MNRAS.274..964P]
-        .. [#] Eggleton, P.P. 2001, Evolution of Binary and Multiple Star Systems, 229, 157: "The Braking of Wind" [2001ASPC..229..157E]
-        .. [#] Nelson, C.A., & Eggleton, P.P. 2001, ApJ, 552, 664:
-        .. [#] ... "A Complete Survey of Case A Binary Evolution with Comparison to Observed Algol-type Systems" [2001ApJ...552..664N]
-        .. [#] Eggleton, P.P., & Kiseleva-Eggleton, L. 2002, ApJ, 575, 461: "The Evolution of Cool Algols" [2002ApJ...575..461E]
-        .. [#] Stancliffe, Glebbeek, Izzard & Pols, 2007 A&A (for thermohaline mixing) [2007A&A...464L..57S]]
-        .. [#] Eldridge & Tout, 2004 MNRAS 348 (for the OPAL 1996 opacity tables) [2004MNRAS.348..201E]
+        .. [#] ADS:1971MNRAS.151..351E ** (Eggleton, P.P. 1971, MNRAS, 151, 351:
+        .. [#] ... "The evolution of low mass stars")
+        .. [#] ADS:2008A&A...488.1007G ** (Glebbeek, Pols & Hurley, 2008 A&A
+        .. [#] ... (for enhancements to the solver))
+        .. [#] ADS:1972MNRAS.156..361E (Eggleton, P.P. 1972, MNRAS, 156, 361:
+        .. [#] ... "Composition changes during stellar evolution")
+        .. [#] ADS:1973MNRAS.163..279E (Eggleton, P.P. 1973, MNRAS, 163, 279:
+        .. [#] ... "A numerical treatment of double shell source stars")
+        .. [#] ADS:1973A&A....23..325E (Eggleton, P.P., Faulkner, J., & Flannery, B.P. 1973, A&A, 23, 325:
+        .. [#] ... "An Approximate Equation of State for Stellar Material")
+        .. [#] ADS:1994MNRAS.270..121H (Han, Z., Podsiadlowski, P., & Eggleton, P.P. 1994, MNRAS, 270, 121:
+        .. [#] ... "A Possible Criterion for Envelope Ejection in Asymptotic Giant Branch or First Giant Branch Stars")
+        .. [#] ADS:1995MNRAS.274..964P (Pols, O.R., Tout, C.A., Eggleton, P.P., & Han, Z. 1995, MNRAS, 274, 964:
+        .. [#] ... "Approximate input physics for stellar modelling")
+        .. [#] ADS:2001ASPC..229..157E (Eggleton, P.P. 2001, Evolution of Binary and Multiple Star Systems, 229, 157:
+        .. [#] ... "The Braking of Wind")
+        .. [#] ADS:2001ApJ...552..664N (Nelson, C.A., & Eggleton, P.P. 2001, ApJ, 552, 664:
+        .. [#] ... "A Complete Survey of Case A Binary Evolution with Comparison to Observed Algol-type Systems")
+        .. [#] ADS:2002ApJ...575..461E (Eggleton, P.P., & Kiseleva-Eggleton, L. 2002, ApJ, 575, 461:
+        .. [#] ... "The Evolution of Cool Algols")
+        .. [#] ADS:2007A&A...464L..57S (Stancliffe, Glebbeek, Izzard & Pols, 2007 A&A
+        .. [#] ... (for thermohaline mixing))
+        .. [#] ADS:2004MNRAS.348..201E (Eldridge & Tout, 2004 MNRAS 348
+        .. [#] ... (for the OPAL 1996 opacity tables))
     """
     use_modules = ['twinlib', 'import']
 

src/amuse/community/fi/interface.py

@@ -27,10 +27,10 @@ class FiInterface(
     future. (and I will think of a better name)
     
     The relevant references are:
-        .. [#] ** Hernquist & Katz, 1989, ApJS 70, 419 [1989ApJS...70..419H]
-        .. [#] ** Pelupessy, van der Werf & Icke, 2004, A&A 422, 55 [2004A&A...422...55P]
-        .. [#] Pelupessy, PhD thesis 2005, Leiden Observatory [2005PhDT........17P]
-        .. [#] Gerritsen & Icke, 1997, A&A 325, 972 [1997A&A...325..972G]
+        .. [#] ADS:1989ApJS...70..419H ** (Hernquist & Katz, 1989, ApJS 70, 419)
+        .. [#] ADS:2004A&A...422...55P ** (Pelupessy, van der Werf & Icke, 2004, A&A 422, 55)
+        .. [#] ADS:2005PhDT........17P (Pelupessy, PhD thesis 2005, Leiden Observatory)
+        .. [#] ADS:1997A&A...325..972G (Gerritsen & Icke, 1997, A&A 325, 972)
     """
     get_total_radius=None
     get_total_mass=None

src/amuse/community/fractalcluster/interface.py

@@ -12,8 +12,7 @@ class FractalClusterInterface(CodeInterface,  LiteratureReferencesMixIn):
     subunits forcing the number of cells if force=.true.
     
     reference:
-        .. [#] Simon Goodwin & Ant Whitworth (2004, A&A, 413, 929) [2004A&A...413..929G]
-
+        .. [#] ADS:2004A&A...413..929G (Simon Goodwin & Ant Whitworth (2004, A&A, 413, 929))
     """
 
     def __init__(self, **options):

src/amuse/community/gadget2/interface.py

@@ -32,15 +32,15 @@ class Gadget2Interface(
     dynamic range which is, in principle, unlimited. 
     
     The relevant references are:
-        .. [#] Springel V., 2005, MNRAS, 364, 1105  (GADGET-2) [2005MNRAS.364.1105S]
-        .. [#] Springel V., Yoshida N., White S. D. M., 2001, New Astronomy, 6, 51  (GADGET-1) [2001NewA....6...79S]
-        .. [#] Durier F., Dalla Vecchia C., 2012, MNRAS (Time integration scheme fix) [2012MNRAS.419..465D]
+        .. [#] ADS:2005MNRAS.364.1105S (Springel V., 2005, MNRAS, 364, 1105  (GADGET-2))
+        .. [#] ADS:2001NewA....6...79S (Springel V., Yoshida N., White S. D. M., 2001, New Astronomy, 6, 51  (GADGET-1))
+        .. [#] ADS:2012MNRAS.419..465D (Durier F., Dalla Vecchia C., 2012, MNRAS (Time integration scheme fix))
     """
     include_headers = ['interface.h', 'worker_code.h', 'stopcond.h']
 
     MODE_NORMAL = 'normal'
-    MODE_PERIODIC_BOUNDARIES   = 'periodic'
-    MODE_PERIODIC_NOGRAVITY   = 'periodic_nogravity'
+    MODE_PERIODIC_BOUNDARIES = 'periodic'
+    MODE_PERIODIC_NOGRAVITY = 'periodic_nogravity'
     MODE_NOGRAVITY = 'nogravity'
 
     def __init__(self, mode = MODE_NORMAL,  **options):

src/amuse/community/halogen/interface.py

@@ -15,7 +15,7 @@ class HalogenInterface(CodeInterface, CommonCodeInterface, LiteratureReferencesM
     from the distribution function of the models.
     
     Relevant references:
-        .. [#] Zemp M., Moore B., Stadel J., Carollo C.M. & Madau P. 2008, MNRAS, 386, 1543 [2008MNRAS.386.1543Z]
+        .. [#] ADS:2008MNRAS.386.1543Z (Zemp M., Moore B., Stadel J., Carollo C.M. & Madau P. 2008, MNRAS, 386, 1543)
     """
 
     include_headers = ['worker_code.h']

src/amuse/community/hermite/interface.py

@@ -15,7 +15,7 @@ class HermiteInterface(CodeInterface,
     using the Hermite integration scheme.
 
 
-    .. [#] Hut, P., Makino, J. & McMillan, S., *Astrophysical Journal Letters* , **443**, L93-L96 (1995) [1995ApJ...443L..93H]
+    .. [#] ADS:1995ApJ...443L..93H (Hut, P., Makino, J. & McMillan, S., *Astrophysical Journal Letters* , **443**, L93-L96 (1995))
     """
     include_headers = ['worker_code.h', 'stopcond.h']
 

src/amuse/community/higpus/interface.py

@@ -11,7 +11,8 @@ class HiGPUsInterface(CodeInterface, GravitationalDynamicsInterface):
     time steps such to be able to deal with stiff problems like highly collisional gravitational N-body 
     problems.
 
-    .. [#] R. Capuzzo-Dolcetta, M. Spera, D.Punzo, 'A fully parallel, high precision, N-body code running on hybrid computing platforms', *Journal of Computational Physics*, Volume 236, 1 March 2013, Pages 580-593 [2013JCoPh.236..580C].
+    .. [#] ADS:2013JCoPh.236..580C (R. Capuzzo-Dolcetta, M. Spera, D.Punzo, *Journal of Computational Physics*, Volume 236, 1 March 2013, Pages 580-593:
+    .. [#] ... 'A fully parallel, high precision, N-body code running on hybrid computing platforms')
     """
 
 

src/amuse/community/hop/interface.py

@@ -19,7 +19,8 @@
 
 class HopInterface(CodeInterface, CommonCodeInterface, LiteratureReferencesMixIn):
     '''
-        .. [#] Eisenstein, DJ, Hut, P, HOP: A new group-finding algorithm for N-body simulations, ApJ 498 (1998) [1998ApJ...498..137E]
+    .. [#] ADS:1998ApJ...498..137E (Eisenstein, DJ, Hut, P, ApJ 498 (1998):
+    .. [#] ... HOP: A new group-finding algorithm for N-body simulations)
     '''
     include_headers = ['worker_code.h']
 

src/amuse/community/huayno/interface.py

@@ -15,8 +15,8 @@ class HuaynoInterface(CodeInterface,
     AMUSE environment. It can make use of GPUs - for this an OpenCL
     version can be compiled.
 
-    .. [#] Pelupessy, Federico I.; J\"anes, J\"urgen; Portegies Zwart, Simon, New Astronomy, Volume 17, Issue 8, p. 711-719 [2012NewA...17..711P]
-    .. [#] J\"anes, J\"urgen; Pelupessy, Federico I.; Portegies Zwart, Simon, A&A, Volume 570, October 2014 (for CC, OK methods) [2014A&A...570A..20J]
+    .. [#] ADS:2012NewA...17..711P (Pelupessy, Federico I.; J\"anes, J\"urgen; Portegies Zwart, Simon, New Astronomy, Volume 17, Issue 8, p. 711-719)
+    .. [#] ADS:2014A&A...570A..20J (J\"anes, J\"urgen; Pelupessy, Federico I.; Portegies Zwart, Simon, A&A, Volume 570, October 2014 (for CC, OK methods))
     """
     include_headers = ['worker_code.h']
 

src/amuse/community/kepler_orbiters/interface.py

@@ -33,10 +33,10 @@ class KeplerInterface(CodeInterface,
     See the example kepler_orbiters_planets_around_sun.py.
     
     The relevant references are:
-    .. [#] Goncalves Ferrari, Boekholt, Portegies Zwart; 2014 MNRAS, 440, 719 \
-               (SAKURA, method 0 -- default) [2014MNRAS.440..719G]
-    .. [#] Pelupessy, Janes, Portegies Zwart; 2012, New Astronomy, 17, 711 \
-               (HUAYNO, method 1) [2012NewA...17..711P]
+    .. [#] ADS:2014MNRAS.440..719G (Goncalves Ferrari, Boekholt, Portegies Zwart; 2014 MNRAS, 440, 719
+    .. [#] ... (SAKURA, method 0 -- default)
+    .. [#] ADS:2012NewA...17..711P (Pelupessy, Janes, Portegies Zwart; 2012, New Astronomy, 17, 711
+    .. [#] ... (HUAYNO, method 1))
     """
 
     include_headers = ['interface.h']

src/amuse/community/mercury/interface.py

@@ -18,8 +18,8 @@ class MercuryInterface(CodeInterface, CommonCodeInterface, CodeWithDataDirectori
     in Chambers (1999).
     
     Relevant references:
-        .. [#] Chambers J. E., 1999, MNRAS, 304, 793 [1999MNRAS.304..793C]
-        .. [#] Wisdom J. & Holman M., 1991, AJ, 102, 1528 [1991AJ....102.1528W]
+        .. [#] ADS:1999MNRAS.304..793C (Chambers J. E., 1999, MNRAS, 304, 793)
+        .. [#] ADS:1991AJ....102.1528W (Wisdom J. & Holman M., 1991, AJ, 102, 1528)
     """
 
     use_modules = ['StoppingConditions', 'AmuseInterface']