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samtools not working with freyja install #18

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dfeistel3 opened this issue Jan 13, 2022 · 3 comments
Closed

samtools not working with freyja install #18

dfeistel3 opened this issue Jan 13, 2022 · 3 comments

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@dfeistel3
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i keep getting an error when i run freyja:
samtools: error while loading shared libraries: libcrypto.so.1.0.0: cannot open shared object file: No such file or directory

i get the same error when i run samtools alone in the freyja environment.

@joshuailevy
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Hi @dfeistel3! This issue was also encountered here: StaPH-B/docker-builds#268 . Seems to be a conda version issue.

Looks like some possible solutions were proposed here: merenlab/anvio#1479

I'll look into making the appropriate changes later today.

@dfeistel3
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yep that works. freyja demix works now :)

@joshuailevy
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Great. I'll close this issue then, will do some additional testing to figure out what's going on as I prep the next release.

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