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andrewjahn committed Apr 2, 2019
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.. _fASL_Download:


Downloading f-ASL
===============

f-ASL (functional ASL) is a software package written by `Luis Hernandez-Garcia <http://web.eecs.umich.edu/~hernan/>`__. You can download the package by clicking `here <http://web.eecs.umich.edu/~hernan/Public/Programs/>`__ and clicking on the **LuisTools.tar** button.

.. figure:: Download_fASL.png


.. note::
You will need to have Matlab installed to run f-ASL. Most universities can give you a license for free; ask your local IT person for more information.


After you have downloaded the LuisTools file, in your Downloads you should see a file called ``LuisTools.tgz``. Either expand this file by double-clicking on it, or navigating to it with a Terminal and typing the following:

::

tar -xzf LuisTools.tgz


This will create a folder called LuisTools.


Setting the Path
----------------

In order to use f-ASL from anywhere on your computer, you will need to set a path pointing to the f-ASL libraries. If LuisTools is in your Downloads directory, for example, open up Matlab and then type:

::

addpath ~/Downloads/LuisTools


You will then be able to open up f-ASL by typing ``fasl01`` and pressing Enter.

.. figure:: fASL_GUI.png

If you have downloaded and set the path to the f-ASL toolbox correctly, you should see this GUI when you type ``fasl01`` at the Matlab command line.



---------

Video
----------

Click here to see a video of how to download and install f-ASL (coming soon).


Next Steps
---------

Now that you have f-ASL installed, we will use it to analyze a sample ASL dataset. (Need to find a suitable open-access ASL dataset and then point to it)

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