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Installation

Run install.sh on terminal to install all requirements via pip and cpp extension

Run PhyloES

All PhyloES instructions are explained in file run usage_example.py

Comparison with FastME

In order to run FastME-PhyloES comparison tests (as in test_all_banchmarks.py) is necessary to download and install FastME at http://www.atgc-montpellier.fr/fastme/binaries.php software and add executable file into Solvers/FastME

The installation guide can be found in the software download page

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