Skip to content

Commit

Permalink
Update Workflows.md
Browse files Browse the repository at this point in the history
  • Loading branch information
jankoster committed Oct 13, 2017
1 parent 0c2b163 commit 092b987
Showing 1 changed file with 4 additions and 0 deletions.
4 changes: 4 additions & 0 deletions docs/Workflows.md
Original file line number Diff line number Diff line change
Expand Up @@ -23,22 +23,26 @@ Workflow: Marking samples in a YY or XY plot
1. Marking a single sample

With the ‘samples to mark’ option, you can make samples stand out. The easiest is marking a single sample using the R2 default setting. Make sure that you add a samplename (e.g. itcc0288) from the current dataset and press ‘redraw’. The indicated sample is now highlighted by an orange line.


2. Types of markings

We can change the type of mark by changing the mark method from ‘dot’, to one of the other methods. ‘circle’ will draw an open circle around the sample; epicenter will draw a range of larger circles around the marked patient; and ‘arrow’ will place an arrow pointing to the sample.


3. Coloring and marking multiple samples

Marking more than 1 sample is achieved by ’,’ separation (e.g. itcc0288,itcc0021,itcc0013,itcc0132).
Thus far all have been of the same color. We can also change the color of the marker by adding ‘:’ followed by a hex color (e.g. itcc0288,itcc0021,itcc0013,itcc0132:00ff00).


4. Defining sample groups

The previous example made all 4 samples green. We can also define groups and define different colors to every group. Groups are separated by ‘;’. To color our previous example with 2 groups, each having a different color, we define the following: itcc0288,itcc0021:ff00ff;itcc0013,itcc0132:00ff00




Workflow: Array data analysis; find groups
-----

Expand Down

0 comments on commit 092b987

Please sign in to comment.