ARROW-17730: [Go] Implement Take kernels for FSB and VarBinary

go/arrow/compute/internal/kernels/vector_selection.go

@@ -991,19 +991,171 @@ func binaryFilterImpl[OffsetT int32 | int64](ctx *exec.KernelCtx, values, filter
 	return nil
 }
 
-func FilterFSB(ctx *exec.KernelCtx, batch *exec.ExecSpan, out *exec.ExecResult) error {
+func takeExecImpl[T exec.UintTypes](ctx *exec.KernelCtx, outputLen int64, values, indices *exec.ArraySpan, out *exec.ExecResult, visitValid func(int64) error, visitNull func() error) error {
 	var (
-		values       = &batch.Values[0].Array
-		selection    = &batch.Values[1].Array
-		outputLength = getFilterOutputSize(selection, ctx.State.(FilterState).NullSelection)
-		valueSize    = int64(values.Type.(arrow.FixedWidthDataType).Bytes())
-		valueData    = values.Buffers[1].Buf[values.Offset*valueSize:]
+		validityBuilder = validityBuilder{mem: exec.GetAllocator(ctx.Ctx)}
+		indicesValues   = exec.GetSpanValues[T](indices, 1)
+		isValid         = indices.Buffers[0].Buf
+		valuesHaveNulls = values.MayHaveNulls()
+
+		indicesIsValid = bitutil.OptionalBitIndexer{Bitmap: isValid, Offset: int(indices.Offset)}
+		valuesIsValid  = bitutil.OptionalBitIndexer{Bitmap: values.Buffers[0].Buf, Offset: int(values.Offset)}
+		bitCounter     = bitutils.NewOptionalBitBlockCounter(isValid, indices.Offset, indices.Len)
+		pos            int64
+	)
+
+	validityBuilder.Reserve(outputLen)
+	for pos < indices.Len {
+		block := bitCounter.NextBlock()
+		indicesHaveNulls := block.Popcnt < block.Len
+		if !indicesHaveNulls && !valuesHaveNulls {
+			// fastest path, neither indices nor values have nulls
+			validityBuilder.UnsafeAppendN(int64(block.Len), true)
+			for i := 0; i < int(block.Len); i++ {
+				if err := visitValid(int64(indicesValues[pos])); err != nil {
+					return err
+				}
+				pos++
+			}
+		} else if block.Popcnt > 0 {
+			// since we have to branch on whether indices are null or not,
+			// we combine the "non-null indices block but some values null"
+			// and "some null indices block but values non-null" into single loop
+			for i := 0; i < int(block.Len); i++ {
+				if (!indicesHaveNulls || indicesIsValid.GetBit(int(pos))) && valuesIsValid.GetBit(int(indicesValues[pos])) {
+					validityBuilder.UnsafeAppend(true)
+					if err := visitValid(int64(indicesValues[pos])); err != nil {
+						return err
+					}
+				} else {
+					validityBuilder.UnsafeAppend(false)
+					if err := visitNull(); err != nil {
+						return err
+					}
+				}
+				pos++
+			}
+		} else {
+			// the whole block is null
+			validityBuilder.UnsafeAppendN(int64(block.Len), false)
+			for i := 0; i < int(block.Len); i++ {
+				if err := visitNull(); err != nil {
+					return err
+				}
+			}
+			pos += int64(block.Len)
+		}
+	}
+
+	out.Len = int64(validityBuilder.bitLength)
+	out.Nulls = int64(validityBuilder.falseCount)
+	out.Buffers[0].WrapBuffer(validityBuilder.Finish())
+	return nil
+}
+
+func takeExec(ctx *exec.KernelCtx, outputLen int64, values, indices *exec.ArraySpan, out *exec.ExecResult, visitValid func(int64) error, visitNull func() error) error {
+	indexWidth := indices.Type.(arrow.FixedWidthDataType).Bytes()
+
+	switch indexWidth {
+	case 1:
+		return takeExecImpl[uint8](ctx, outputLen, values, indices, out, visitValid, visitNull)
+	case 2:
+		return takeExecImpl[uint16](ctx, outputLen, values, indices, out, visitValid, visitNull)
+	case 4:
+		return takeExecImpl[uint32](ctx, outputLen, values, indices, out, visitValid, visitNull)
+	case 8:
+		return takeExecImpl[uint64](ctx, outputLen, values, indices, out, visitValid, visitNull)
+	default:
+		return fmt.Errorf("%w: invalid index width", arrow.ErrInvalid)
+	}
+}
+
+type outputFn func(*exec.KernelCtx, int64, *exec.ArraySpan, *exec.ArraySpan, *exec.ExecResult, func(int64) error, func() error) error
+type implFn func(*exec.KernelCtx, *exec.ExecSpan, int64, *exec.ExecResult, outputFn) error
+
+func FilterExec(impl implFn, fn outputFn) exec.ArrayKernelExec {
+	return func(ctx *exec.KernelCtx, batch *exec.ExecSpan, out *exec.ExecResult) error {
+		var (
+			selection    = &batch.Values[1].Array
+			outputLength = getFilterOutputSize(selection, ctx.State.(FilterState).NullSelection)
+		)
+		return impl(ctx, batch, outputLength, out, fn)
+	}
+}
+
+func TakeExec(impl implFn, fn outputFn) exec.ArrayKernelExec {
+	return func(ctx *exec.KernelCtx, batch *exec.ExecSpan, out *exec.ExecResult) error {
+		if ctx.State.(TakeState).BoundsCheck {
+			if err := checkIndexBounds(&batch.Values[1].Array, uint64(batch.Values[0].Array.Len)); err != nil {
+				return err
+			}
+		}
+
+		return impl(ctx, batch, batch.Values[1].Array.Len, out, fn)
+	}
+}
+
+func VarBinaryImpl[OffsetT int32 | int64](ctx *exec.KernelCtx, batch *exec.ExecSpan, outputLength int64, out *exec.ExecResult, fn outputFn) error {
+	var (
+		values        = &batch.Values[0].Array
+		selection     = &batch.Values[1].Array
+		rawOffsets    = exec.GetSpanOffsets[OffsetT](values, 1)
+		rawData       = values.Buffers[2].Buf
+		offsetBuilder = newBufferBuilder[OffsetT](exec.GetAllocator(ctx.Ctx))
+		dataBuilder   = newBufferBuilder[uint8](exec.GetAllocator(ctx.Ctx))
+	)
+
+	// presize the data builder with a rough estimate of the required data size
+	if values.Len > 0 {
+		dataLength := rawOffsets[values.Len] - rawOffsets[0]
+		meanValueLen := float64(dataLength) / float64(values.Len)
+		dataBuilder.reserve(int(meanValueLen))
+	}
+
+	offsetBuilder.reserve(int(outputLength) + 1)
+	spaceAvail := dataBuilder.cap()
+	var offset OffsetT
+	err := fn(ctx, outputLength, values, selection, out,
+		func(idx int64) error {
+			offsetBuilder.unsafeAppend(offset)
+			valOffset := rawOffsets[idx]
+			valSize := rawOffsets[idx+1] - valOffset
+
+			offset += valSize
+			if valSize > OffsetT(spaceAvail) {
+				dataBuilder.reserve(int(valSize))
+				spaceAvail = dataBuilder.cap() - dataBuilder.len()
+			}
+			dataBuilder.unsafeAppendSlice(rawData[valOffset : valOffset+valSize])
+			spaceAvail -= int(valSize)
+			return nil
+		}, func() error {
+			offsetBuilder.unsafeAppend(offset)
+			return nil
+		})
+
+	if err != nil {
+		return err
+	}
+
+	offsetBuilder.unsafeAppend(offset)
+	out.Buffers[1].WrapBuffer(offsetBuilder.finish())
+	out.Buffers[2].WrapBuffer(dataBuilder.finish())
+	return nil
+}
+
+func FSBImpl(ctx *exec.KernelCtx, batch *exec.ExecSpan, outputLength int64, out *exec.ExecResult, fn outputFn) error {
+	var (
+		values    = &batch.Values[0].Array
+		selection = &batch.Values[1].Array
+		valueSize = int64(values.Type.(arrow.FixedWidthDataType).Bytes())
+		valueData = values.Buffers[1].Buf[values.Offset*valueSize:]
 	)
 
 	out.Buffers[1].WrapBuffer(ctx.Allocate(int(valueSize * outputLength)))
 	buf := out.Buffers[1].Buf
 
-	err := filterExec(ctx, outputLength, values, selection, out,
+	err := fn(ctx, outputLength, values, selection, out,
 		func(idx int64) error {
 			start := idx * int64(valueSize)
 			copy(buf, valueData[start:start+valueSize])
@@ -1076,16 +1228,21 @@ func GetVectorSelectionKernels() (filterkernels, takeKernels []SelectionKernelDa
 	filterkernels = []SelectionKernelData{
 		{In: exec.NewMatchedInput(exec.Primitive()), Exec: PrimitiveFilter},
 		{In: exec.NewExactInput(arrow.Null), Exec: NullFilter},
-		{In: exec.NewIDInput(arrow.DECIMAL128), Exec: FilterFSB},
-		{In: exec.NewIDInput(arrow.DECIMAL256), Exec: FilterFSB},
-		{In: exec.NewIDInput(arrow.FIXED_SIZE_BINARY), Exec: FilterFSB},
+		{In: exec.NewIDInput(arrow.DECIMAL128), Exec: FilterExec(FSBImpl, filterExec)},
+		{In: exec.NewIDInput(arrow.DECIMAL256), Exec: FilterExec(FSBImpl, filterExec)},
+		{In: exec.NewIDInput(arrow.FIXED_SIZE_BINARY), Exec: FilterExec(FSBImpl, filterExec)},
 		{In: exec.NewMatchedInput(exec.BinaryLike()), Exec: FilterBinary},
 		{In: exec.NewMatchedInput(exec.LargeBinaryLike()), Exec: FilterBinary},
 	}
 
 	takeKernels = []SelectionKernelData{
 		{In: exec.NewExactInput(arrow.Null), Exec: NullTake},
 		{In: exec.NewMatchedInput(exec.Primitive()), Exec: PrimitiveTake},
+		{In: exec.NewIDInput(arrow.DECIMAL128), Exec: TakeExec(FSBImpl, takeExec)},
+		{In: exec.NewIDInput(arrow.DECIMAL256), Exec: TakeExec(FSBImpl, takeExec)},
+		{In: exec.NewIDInput(arrow.FIXED_SIZE_BINARY), Exec: TakeExec(FSBImpl, takeExec)},
+		{In: exec.NewMatchedInput(exec.BinaryLike()), Exec: TakeExec(VarBinaryImpl[int32], takeExec)},
+		{In: exec.NewMatchedInput(exec.LargeBinaryLike()), Exec: TakeExec(VarBinaryImpl[int64], takeExec)},
 	}
 	return
 }

go/arrow/compute/vector_selection_test.go

@@ -663,11 +663,62 @@ func (tk *TakeKernelTestNumeric) TestTakeNumeric() {
 	})
 }
 
+type TakeKernelTestFSB struct {
+	TakeKernelTestTyped
+}
+
+func (tk *TakeKernelTestFSB) SetupSuite() {
+	tk.dt = &arrow.FixedSizeBinaryType{ByteWidth: 3}
+}
+
+func (tk *TakeKernelTestFSB) TestFixedSizeBinary() {
+	// YWFh == base64("aaa")
+	// YmJi == base64("bbb")
+	// Y2Nj == base64("ccc")
+	tk.assertTake(`["YWFh", "YmJi", "Y2Nj"]`, `[0, 1, 0]`, `["YWFh", "YmJi", "YWFh"]`)
+	tk.assertTake(`[null, "YmJi", "Y2Nj"]`, `[0, 1, 0]`, `[null, "YmJi", null]`)
+	tk.assertTake(`["YWFh", "YmJi", "Y2Nj"]`, `[null, 1, 0]`, `[null, "YmJi", "YWFh"]`)
+
+	tk.assertNoValidityBitmapUnknownNullCountJSON(tk.dt, `["YWFh", "YmJi", "Y2Nj"]`, `[0, 1, 0]`)
+
+	_, err := tk.takeJSON(tk.dt, `["YWFh", "YmJi", "Y2Nj"]`, arrow.PrimitiveTypes.Int8, `[0, 9, 0]`)
+	tk.ErrorIs(err, arrow.ErrIndex)
+	_, err = tk.takeJSON(tk.dt, `["YWFh", "YmJi", "Y2Nj"]`, arrow.PrimitiveTypes.Int64, `[2, 5]`)
+	tk.ErrorIs(err, arrow.ErrIndex)
+}
+
+type TakeKernelTestString struct {
+	TakeKernelTestTyped
+}
+
+func (tk *TakeKernelTestString) TestTakeString() {
+	tk.Run(tk.dt.String(), func() {
+		// base64 encoded so the binary non-utf8 arrays work
+		// YQ== -> "a"
+		// Yg== -> "b"
+		// Yw== -> "c"
+		tk.assertTake(`["YQ==", "Yg==", "Yw=="]`, `[0, 1, 0]`, `["YQ==", "Yg==", "YQ=="]`)
+		tk.assertTake(`[null, "Yg==", "Yw=="]`, `[0, 1, 0]`, `[null, "Yg==", null]`)
+		tk.assertTake(`["YQ==", "Yg==", "Yw=="]`, `[null, 1, 0]`, `[null, "Yg==", "YQ=="]`)
+
+		tk.assertNoValidityBitmapUnknownNullCountJSON(tk.dt, `["YQ==", "Yg==", "Yw=="]`, `[0, 1, 0]`)
+
+		_, err := tk.takeJSON(tk.dt, `["YQ==", "Yg==", "Yw=="]`, arrow.PrimitiveTypes.Int8, `[0, 9, 0]`)
+		tk.ErrorIs(err, arrow.ErrIndex)
+		_, err = tk.takeJSON(tk.dt, `["YQ==", "Yg==", "Yw=="]`, arrow.PrimitiveTypes.Int64, `[2, 5]`)
+		tk.ErrorIs(err, arrow.ErrIndex)
+	})
+}
+
 func TestTakeKernels(t *testing.T) {
 	suite.Run(t, new(TakeKernelTest))
 	for _, dt := range numericTypes {
 		suite.Run(t, &TakeKernelTestNumeric{TakeKernelTestTyped: TakeKernelTestTyped{dt: dt}})
 	}
+	suite.Run(t, new(TakeKernelTestFSB))
+	for _, dt := range baseBinaryTypes {
+		suite.Run(t, &TakeKernelTestString{TakeKernelTestTyped: TakeKernelTestTyped{dt: dt}})
+	}
 }
 
 func TestFilterKernels(t *testing.T) {