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TestHStore.java
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TestHStore.java
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/**
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements. See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership. The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.apache.hadoop.hbase.regionserver;
import static org.junit.Assert.assertArrayEquals;
import static org.junit.Assert.assertEquals;
import static org.junit.Assert.assertFalse;
import static org.junit.Assert.assertTrue;
import static org.junit.Assert.fail;
import static org.mockito.ArgumentMatchers.any;
import static org.mockito.Mockito.mock;
import static org.mockito.Mockito.spy;
import static org.mockito.Mockito.times;
import static org.mockito.Mockito.verify;
import static org.mockito.Mockito.when;
import java.io.IOException;
import java.lang.ref.SoftReference;
import java.security.PrivilegedExceptionAction;
import java.util.ArrayList;
import java.util.Arrays;
import java.util.Collection;
import java.util.Collections;
import java.util.Iterator;
import java.util.List;
import java.util.ListIterator;
import java.util.NavigableSet;
import java.util.TreeSet;
import java.util.concurrent.ConcurrentSkipListSet;
import java.util.concurrent.CountDownLatch;
import java.util.concurrent.CyclicBarrier;
import java.util.concurrent.ExecutorService;
import java.util.concurrent.Executors;
import java.util.concurrent.ThreadPoolExecutor;
import java.util.concurrent.TimeUnit;
import java.util.concurrent.atomic.AtomicBoolean;
import java.util.concurrent.atomic.AtomicInteger;
import java.util.concurrent.atomic.AtomicLong;
import java.util.concurrent.atomic.AtomicReference;
import java.util.function.IntBinaryOperator;
import org.apache.hadoop.conf.Configuration;
import org.apache.hadoop.fs.FSDataOutputStream;
import org.apache.hadoop.fs.FileStatus;
import org.apache.hadoop.fs.FileSystem;
import org.apache.hadoop.fs.FilterFileSystem;
import org.apache.hadoop.fs.LocalFileSystem;
import org.apache.hadoop.fs.Path;
import org.apache.hadoop.fs.permission.FsPermission;
import org.apache.hadoop.hbase.Cell;
import org.apache.hadoop.hbase.CellBuilderFactory;
import org.apache.hadoop.hbase.CellBuilderType;
import org.apache.hadoop.hbase.CellComparator;
import org.apache.hadoop.hbase.CellComparatorImpl;
import org.apache.hadoop.hbase.CellUtil;
import org.apache.hadoop.hbase.HBaseClassTestRule;
import org.apache.hadoop.hbase.HBaseConfiguration;
import org.apache.hadoop.hbase.HBaseTestingUtility;
import org.apache.hadoop.hbase.HConstants;
import org.apache.hadoop.hbase.KeyValue;
import org.apache.hadoop.hbase.MemoryCompactionPolicy;
import org.apache.hadoop.hbase.NamespaceDescriptor;
import org.apache.hadoop.hbase.PrivateCellUtil;
import org.apache.hadoop.hbase.TableName;
import org.apache.hadoop.hbase.client.ColumnFamilyDescriptor;
import org.apache.hadoop.hbase.client.ColumnFamilyDescriptorBuilder;
import org.apache.hadoop.hbase.client.Get;
import org.apache.hadoop.hbase.client.RegionInfo;
import org.apache.hadoop.hbase.client.RegionInfoBuilder;
import org.apache.hadoop.hbase.client.Scan;
import org.apache.hadoop.hbase.client.Scan.ReadType;
import org.apache.hadoop.hbase.client.TableDescriptor;
import org.apache.hadoop.hbase.client.TableDescriptorBuilder;
import org.apache.hadoop.hbase.exceptions.IllegalArgumentIOException;
import org.apache.hadoop.hbase.filter.Filter;
import org.apache.hadoop.hbase.filter.FilterBase;
import org.apache.hadoop.hbase.io.compress.Compression;
import org.apache.hadoop.hbase.io.encoding.DataBlockEncoding;
import org.apache.hadoop.hbase.io.hfile.CacheConfig;
import org.apache.hadoop.hbase.io.hfile.HFile;
import org.apache.hadoop.hbase.io.hfile.HFileContext;
import org.apache.hadoop.hbase.io.hfile.HFileContextBuilder;
import org.apache.hadoop.hbase.monitoring.MonitoredTask;
import org.apache.hadoop.hbase.quotas.RegionSizeStoreImpl;
import org.apache.hadoop.hbase.regionserver.MemStoreCompactionStrategy.Action;
import org.apache.hadoop.hbase.regionserver.compactions.CompactionConfiguration;
import org.apache.hadoop.hbase.regionserver.compactions.DefaultCompactor;
import org.apache.hadoop.hbase.regionserver.querymatcher.ScanQueryMatcher;
import org.apache.hadoop.hbase.regionserver.throttle.NoLimitThroughputController;
import org.apache.hadoop.hbase.security.User;
import org.apache.hadoop.hbase.testclassification.MediumTests;
import org.apache.hadoop.hbase.testclassification.RegionServerTests;
import org.apache.hadoop.hbase.util.Bytes;
import org.apache.hadoop.hbase.util.CommonFSUtils;
import org.apache.hadoop.hbase.util.EnvironmentEdgeManager;
import org.apache.hadoop.hbase.util.EnvironmentEdgeManagerTestHelper;
import org.apache.hadoop.hbase.util.IncrementingEnvironmentEdge;
import org.apache.hadoop.hbase.util.ManualEnvironmentEdge;
import org.apache.hadoop.hbase.wal.AbstractFSWALProvider;
import org.apache.hadoop.hbase.wal.WALFactory;
import org.apache.hadoop.util.Progressable;
import org.junit.After;
import org.junit.AfterClass;
import org.junit.Before;
import org.junit.ClassRule;
import org.junit.Rule;
import org.junit.Test;
import org.junit.experimental.categories.Category;
import org.junit.rules.TestName;
import org.mockito.Mockito;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import org.apache.hbase.thirdparty.com.google.common.collect.Lists;
/**
* Test class for the HStore
*/
@Category({ RegionServerTests.class, MediumTests.class })
public class TestHStore {
@ClassRule
public static final HBaseClassTestRule CLASS_RULE =
HBaseClassTestRule.forClass(TestHStore.class);
private static final Logger LOG = LoggerFactory.getLogger(TestHStore.class);
@Rule
public TestName name = new TestName();
HRegion region;
HStore store;
byte [] table = Bytes.toBytes("table");
byte [] family = Bytes.toBytes("family");
byte [] row = Bytes.toBytes("row");
byte [] row2 = Bytes.toBytes("row2");
byte [] qf1 = Bytes.toBytes("qf1");
byte [] qf2 = Bytes.toBytes("qf2");
byte [] qf3 = Bytes.toBytes("qf3");
byte [] qf4 = Bytes.toBytes("qf4");
byte [] qf5 = Bytes.toBytes("qf5");
byte [] qf6 = Bytes.toBytes("qf6");
NavigableSet<byte[]> qualifiers = new ConcurrentSkipListSet<>(Bytes.BYTES_COMPARATOR);
List<Cell> expected = new ArrayList<>();
List<Cell> result = new ArrayList<>();
long id = EnvironmentEdgeManager.currentTime();
Get get = new Get(row);
private static final HBaseTestingUtility TEST_UTIL = new HBaseTestingUtility();
private static final String DIR = TEST_UTIL.getDataTestDir("TestStore").toString();
@Before
public void setUp() throws IOException {
qualifiers.clear();
qualifiers.add(qf1);
qualifiers.add(qf3);
qualifiers.add(qf5);
Iterator<byte[]> iter = qualifiers.iterator();
while(iter.hasNext()){
byte [] next = iter.next();
expected.add(new KeyValue(row, family, next, 1, (byte[])null));
get.addColumn(family, next);
}
}
private void init(String methodName) throws IOException {
init(methodName, TEST_UTIL.getConfiguration());
}
private HStore init(String methodName, Configuration conf) throws IOException {
// some of the tests write 4 versions and then flush
// (with HBASE-4241, lower versions are collected on flush)
return init(methodName, conf,
ColumnFamilyDescriptorBuilder.newBuilder(family).setMaxVersions(4).build());
}
private HStore init(String methodName, Configuration conf, ColumnFamilyDescriptor hcd)
throws IOException {
return init(methodName, conf, TableDescriptorBuilder.newBuilder(TableName.valueOf(table)), hcd);
}
private HStore init(String methodName, Configuration conf, TableDescriptorBuilder builder,
ColumnFamilyDescriptor hcd) throws IOException {
return init(methodName, conf, builder, hcd, null);
}
private HStore init(String methodName, Configuration conf, TableDescriptorBuilder builder,
ColumnFamilyDescriptor hcd, MyStoreHook hook) throws IOException {
return init(methodName, conf, builder, hcd, hook, false);
}
private void initHRegion(String methodName, Configuration conf, TableDescriptorBuilder builder,
ColumnFamilyDescriptor hcd, MyStoreHook hook, boolean switchToPread) throws IOException {
TableDescriptor htd = builder.setColumnFamily(hcd).build();
Path basedir = new Path(DIR + methodName);
Path tableDir = CommonFSUtils.getTableDir(basedir, htd.getTableName());
final Path logdir = new Path(basedir, AbstractFSWALProvider.getWALDirectoryName(methodName));
FileSystem fs = FileSystem.get(conf);
fs.delete(logdir, true);
ChunkCreator.initialize(MemStoreLAB.CHUNK_SIZE_DEFAULT, false,
MemStoreLABImpl.CHUNK_SIZE_DEFAULT, 1, 0,
null, MemStoreLAB.INDEX_CHUNK_SIZE_PERCENTAGE_DEFAULT);
RegionInfo info = RegionInfoBuilder.newBuilder(htd.getTableName()).build();
Configuration walConf = new Configuration(conf);
CommonFSUtils.setRootDir(walConf, basedir);
WALFactory wals = new WALFactory(walConf, methodName);
region = new HRegion(new HRegionFileSystem(conf, fs, tableDir, info), wals.getWAL(info), conf,
htd, null);
region.regionServicesForStores = Mockito.spy(region.regionServicesForStores);
ThreadPoolExecutor pool = (ThreadPoolExecutor) Executors.newFixedThreadPool(1);
Mockito.when(region.regionServicesForStores.getInMemoryCompactionPool()).thenReturn(pool);
}
private HStore init(String methodName, Configuration conf, TableDescriptorBuilder builder,
ColumnFamilyDescriptor hcd, MyStoreHook hook, boolean switchToPread) throws IOException {
initHRegion(methodName, conf, builder, hcd, hook, switchToPread);
if (hook == null) {
store = new HStore(region, hcd, conf, false);
} else {
store = new MyStore(region, hcd, conf, hook, switchToPread);
}
return store;
}
/**
* Test we do not lose data if we fail a flush and then close.
* Part of HBase-10466
*/
@Test
public void testFlushSizeSizing() throws Exception {
LOG.info("Setting up a faulty file system that cannot write in " + this.name.getMethodName());
final Configuration conf = HBaseConfiguration.create(TEST_UTIL.getConfiguration());
// Only retry once.
conf.setInt("hbase.hstore.flush.retries.number", 1);
User user = User.createUserForTesting(conf, this.name.getMethodName(),
new String[]{"foo"});
// Inject our faulty LocalFileSystem
conf.setClass("fs.file.impl", FaultyFileSystem.class, FileSystem.class);
user.runAs(new PrivilegedExceptionAction<Object>() {
@Override
public Object run() throws Exception {
// Make sure it worked (above is sensitive to caching details in hadoop core)
FileSystem fs = FileSystem.get(conf);
assertEquals(FaultyFileSystem.class, fs.getClass());
FaultyFileSystem ffs = (FaultyFileSystem)fs;
// Initialize region
init(name.getMethodName(), conf);
MemStoreSize mss = store.memstore.getFlushableSize();
assertEquals(0, mss.getDataSize());
LOG.info("Adding some data");
MemStoreSizing kvSize = new NonThreadSafeMemStoreSizing();
store.add(new KeyValue(row, family, qf1, 1, (byte[]) null), kvSize);
// add the heap size of active (mutable) segment
kvSize.incMemStoreSize(0, MutableSegment.DEEP_OVERHEAD, 0, 0);
mss = store.memstore.getFlushableSize();
assertEquals(kvSize.getMemStoreSize(), mss);
// Flush. Bug #1 from HBASE-10466. Make sure size calculation on failed flush is right.
try {
LOG.info("Flushing");
flushStore(store, id++);
fail("Didn't bubble up IOE!");
} catch (IOException ioe) {
assertTrue(ioe.getMessage().contains("Fault injected"));
}
// due to snapshot, change mutable to immutable segment
kvSize.incMemStoreSize(0,
CSLMImmutableSegment.DEEP_OVERHEAD_CSLM - MutableSegment.DEEP_OVERHEAD, 0, 0);
mss = store.memstore.getFlushableSize();
assertEquals(kvSize.getMemStoreSize(), mss);
MemStoreSizing kvSize2 = new NonThreadSafeMemStoreSizing();
store.add(new KeyValue(row, family, qf2, 2, (byte[]) null), kvSize2);
kvSize2.incMemStoreSize(0, MutableSegment.DEEP_OVERHEAD, 0, 0);
// Even though we add a new kv, we expect the flushable size to be 'same' since we have
// not yet cleared the snapshot -- the above flush failed.
assertEquals(kvSize.getMemStoreSize(), mss);
ffs.fault.set(false);
flushStore(store, id++);
mss = store.memstore.getFlushableSize();
// Size should be the foreground kv size.
assertEquals(kvSize2.getMemStoreSize(), mss);
flushStore(store, id++);
mss = store.memstore.getFlushableSize();
assertEquals(0, mss.getDataSize());
assertEquals(MutableSegment.DEEP_OVERHEAD, mss.getHeapSize());
return null;
}
});
}
/**
* Verify that compression and data block encoding are respected by the
* Store.createWriterInTmp() method, used on store flush.
*/
@Test
public void testCreateWriter() throws Exception {
Configuration conf = HBaseConfiguration.create();
FileSystem fs = FileSystem.get(conf);
ColumnFamilyDescriptor hcd = ColumnFamilyDescriptorBuilder.newBuilder(family)
.setCompressionType(Compression.Algorithm.GZ).setDataBlockEncoding(DataBlockEncoding.DIFF)
.build();
init(name.getMethodName(), conf, hcd);
// Test createWriterInTmp()
StoreFileWriter writer =
store.createWriterInTmp(4, hcd.getCompressionType(), false, true, false, false);
Path path = writer.getPath();
writer.append(new KeyValue(row, family, qf1, Bytes.toBytes(1)));
writer.append(new KeyValue(row, family, qf2, Bytes.toBytes(2)));
writer.append(new KeyValue(row2, family, qf1, Bytes.toBytes(3)));
writer.append(new KeyValue(row2, family, qf2, Bytes.toBytes(4)));
writer.close();
// Verify that compression and encoding settings are respected
HFile.Reader reader = HFile.createReader(fs, path, new CacheConfig(conf), true, conf);
assertEquals(hcd.getCompressionType(), reader.getTrailer().getCompressionCodec());
assertEquals(hcd.getDataBlockEncoding(), reader.getDataBlockEncoding());
reader.close();
}
@Test
public void testDeleteExpiredStoreFiles() throws Exception {
testDeleteExpiredStoreFiles(0);
testDeleteExpiredStoreFiles(1);
}
/**
* @param minVersions the MIN_VERSIONS for the column family
*/
public void testDeleteExpiredStoreFiles(int minVersions) throws Exception {
int storeFileNum = 4;
int ttl = 4;
IncrementingEnvironmentEdge edge = new IncrementingEnvironmentEdge();
EnvironmentEdgeManagerTestHelper.injectEdge(edge);
Configuration conf = HBaseConfiguration.create();
// Enable the expired store file deletion
conf.setBoolean("hbase.store.delete.expired.storefile", true);
// Set the compaction threshold higher to avoid normal compactions.
conf.setInt(CompactionConfiguration.HBASE_HSTORE_COMPACTION_MIN_KEY, 5);
init(name.getMethodName() + "-" + minVersions, conf, ColumnFamilyDescriptorBuilder
.newBuilder(family).setMinVersions(minVersions).setTimeToLive(ttl).build());
long storeTtl = this.store.getScanInfo().getTtl();
long sleepTime = storeTtl / storeFileNum;
long timeStamp;
// There are 4 store files and the max time stamp difference among these
// store files will be (this.store.ttl / storeFileNum)
for (int i = 1; i <= storeFileNum; i++) {
LOG.info("Adding some data for the store file #" + i);
timeStamp = EnvironmentEdgeManager.currentTime();
this.store.add(new KeyValue(row, family, qf1, timeStamp, (byte[]) null), null);
this.store.add(new KeyValue(row, family, qf2, timeStamp, (byte[]) null), null);
this.store.add(new KeyValue(row, family, qf3, timeStamp, (byte[]) null), null);
flush(i);
edge.incrementTime(sleepTime);
}
// Verify the total number of store files
assertEquals(storeFileNum, this.store.getStorefiles().size());
// Each call will find one expired store file and delete it before compaction happens.
// There will be no compaction due to threshold above. Last file will not be replaced.
for (int i = 1; i <= storeFileNum - 1; i++) {
// verify the expired store file.
assertFalse(this.store.requestCompaction().isPresent());
Collection<HStoreFile> sfs = this.store.getStorefiles();
// Ensure i files are gone.
if (minVersions == 0) {
assertEquals(storeFileNum - i, sfs.size());
// Ensure only non-expired files remain.
for (HStoreFile sf : sfs) {
assertTrue(sf.getReader().getMaxTimestamp() >= (edge.currentTime() - storeTtl));
}
} else {
assertEquals(storeFileNum, sfs.size());
}
// Let the next store file expired.
edge.incrementTime(sleepTime);
}
assertFalse(this.store.requestCompaction().isPresent());
Collection<HStoreFile> sfs = this.store.getStorefiles();
// Assert the last expired file is not removed.
if (minVersions == 0) {
assertEquals(1, sfs.size());
}
long ts = sfs.iterator().next().getReader().getMaxTimestamp();
assertTrue(ts < (edge.currentTime() - storeTtl));
for (HStoreFile sf : sfs) {
sf.closeStoreFile(true);
}
}
@Test
public void testLowestModificationTime() throws Exception {
Configuration conf = HBaseConfiguration.create();
FileSystem fs = FileSystem.get(conf);
// Initialize region
init(name.getMethodName(), conf);
int storeFileNum = 4;
for (int i = 1; i <= storeFileNum; i++) {
LOG.info("Adding some data for the store file #"+i);
this.store.add(new KeyValue(row, family, qf1, i, (byte[])null), null);
this.store.add(new KeyValue(row, family, qf2, i, (byte[])null), null);
this.store.add(new KeyValue(row, family, qf3, i, (byte[])null), null);
flush(i);
}
// after flush; check the lowest time stamp
long lowestTimeStampFromManager = StoreUtils.getLowestTimestamp(store.getStorefiles());
long lowestTimeStampFromFS = getLowestTimeStampFromFS(fs, store.getStorefiles());
assertEquals(lowestTimeStampFromManager,lowestTimeStampFromFS);
// after compact; check the lowest time stamp
store.compact(store.requestCompaction().get(), NoLimitThroughputController.INSTANCE, null);
lowestTimeStampFromManager = StoreUtils.getLowestTimestamp(store.getStorefiles());
lowestTimeStampFromFS = getLowestTimeStampFromFS(fs, store.getStorefiles());
assertEquals(lowestTimeStampFromManager, lowestTimeStampFromFS);
}
private static long getLowestTimeStampFromFS(FileSystem fs,
final Collection<HStoreFile> candidates) throws IOException {
long minTs = Long.MAX_VALUE;
if (candidates.isEmpty()) {
return minTs;
}
Path[] p = new Path[candidates.size()];
int i = 0;
for (HStoreFile sf : candidates) {
p[i] = sf.getPath();
++i;
}
FileStatus[] stats = fs.listStatus(p);
if (stats == null || stats.length == 0) {
return minTs;
}
for (FileStatus s : stats) {
minTs = Math.min(minTs, s.getModificationTime());
}
return minTs;
}
//////////////////////////////////////////////////////////////////////////////
// Get tests
//////////////////////////////////////////////////////////////////////////////
private static final int BLOCKSIZE_SMALL = 8192;
/**
* Test for hbase-1686.
*/
@Test
public void testEmptyStoreFile() throws IOException {
init(this.name.getMethodName());
// Write a store file.
this.store.add(new KeyValue(row, family, qf1, 1, (byte[])null), null);
this.store.add(new KeyValue(row, family, qf2, 1, (byte[])null), null);
flush(1);
// Now put in place an empty store file. Its a little tricky. Have to
// do manually with hacked in sequence id.
HStoreFile f = this.store.getStorefiles().iterator().next();
Path storedir = f.getPath().getParent();
long seqid = f.getMaxSequenceId();
Configuration c = HBaseConfiguration.create();
FileSystem fs = FileSystem.get(c);
HFileContext meta = new HFileContextBuilder().withBlockSize(BLOCKSIZE_SMALL).build();
StoreFileWriter w = new StoreFileWriter.Builder(c, new CacheConfig(c),
fs)
.withOutputDir(storedir)
.withFileContext(meta)
.build();
w.appendMetadata(seqid + 1, false);
w.close();
this.store.close();
// Reopen it... should pick up two files
this.store =
new HStore(this.store.getHRegion(), this.store.getColumnFamilyDescriptor(), c, false);
assertEquals(2, this.store.getStorefilesCount());
result = HBaseTestingUtility.getFromStoreFile(store,
get.getRow(),
qualifiers);
assertEquals(1, result.size());
}
/**
* Getting data from memstore only
*/
@Test
public void testGet_FromMemStoreOnly() throws IOException {
init(this.name.getMethodName());
//Put data in memstore
this.store.add(new KeyValue(row, family, qf1, 1, (byte[])null), null);
this.store.add(new KeyValue(row, family, qf2, 1, (byte[])null), null);
this.store.add(new KeyValue(row, family, qf3, 1, (byte[])null), null);
this.store.add(new KeyValue(row, family, qf4, 1, (byte[])null), null);
this.store.add(new KeyValue(row, family, qf5, 1, (byte[])null), null);
this.store.add(new KeyValue(row, family, qf6, 1, (byte[])null), null);
//Get
result = HBaseTestingUtility.getFromStoreFile(store,
get.getRow(), qualifiers);
//Compare
assertCheck();
}
@Test
public void testTimeRangeIfSomeCellsAreDroppedInFlush() throws IOException {
testTimeRangeIfSomeCellsAreDroppedInFlush(1);
testTimeRangeIfSomeCellsAreDroppedInFlush(3);
testTimeRangeIfSomeCellsAreDroppedInFlush(5);
}
private void testTimeRangeIfSomeCellsAreDroppedInFlush(int maxVersion) throws IOException {
init(this.name.getMethodName(), TEST_UTIL.getConfiguration(),
ColumnFamilyDescriptorBuilder.newBuilder(family).setMaxVersions(maxVersion).build());
long currentTs = 100;
long minTs = currentTs;
// the extra cell won't be flushed to disk,
// so the min of timerange will be different between memStore and hfile.
for (int i = 0; i != (maxVersion + 1); ++i) {
this.store.add(new KeyValue(row, family, qf1, ++currentTs, (byte[])null), null);
if (i == 1) {
minTs = currentTs;
}
}
flushStore(store, id++);
Collection<HStoreFile> files = store.getStorefiles();
assertEquals(1, files.size());
HStoreFile f = files.iterator().next();
f.initReader();
StoreFileReader reader = f.getReader();
assertEquals(minTs, reader.timeRange.getMin());
assertEquals(currentTs, reader.timeRange.getMax());
}
/**
* Getting data from files only
*/
@Test
public void testGet_FromFilesOnly() throws IOException {
init(this.name.getMethodName());
//Put data in memstore
this.store.add(new KeyValue(row, family, qf1, 1, (byte[])null), null);
this.store.add(new KeyValue(row, family, qf2, 1, (byte[])null), null);
//flush
flush(1);
//Add more data
this.store.add(new KeyValue(row, family, qf3, 1, (byte[])null), null);
this.store.add(new KeyValue(row, family, qf4, 1, (byte[])null), null);
//flush
flush(2);
//Add more data
this.store.add(new KeyValue(row, family, qf5, 1, (byte[])null), null);
this.store.add(new KeyValue(row, family, qf6, 1, (byte[])null), null);
//flush
flush(3);
//Get
result = HBaseTestingUtility.getFromStoreFile(store,
get.getRow(),
qualifiers);
//this.store.get(get, qualifiers, result);
//Need to sort the result since multiple files
Collections.sort(result, CellComparatorImpl.COMPARATOR);
//Compare
assertCheck();
}
/**
* Getting data from memstore and files
*/
@Test
public void testGet_FromMemStoreAndFiles() throws IOException {
init(this.name.getMethodName());
//Put data in memstore
this.store.add(new KeyValue(row, family, qf1, 1, (byte[])null), null);
this.store.add(new KeyValue(row, family, qf2, 1, (byte[])null), null);
//flush
flush(1);
//Add more data
this.store.add(new KeyValue(row, family, qf3, 1, (byte[])null), null);
this.store.add(new KeyValue(row, family, qf4, 1, (byte[])null), null);
//flush
flush(2);
//Add more data
this.store.add(new KeyValue(row, family, qf5, 1, (byte[])null), null);
this.store.add(new KeyValue(row, family, qf6, 1, (byte[])null), null);
//Get
result = HBaseTestingUtility.getFromStoreFile(store,
get.getRow(), qualifiers);
//Need to sort the result since multiple files
Collections.sort(result, CellComparatorImpl.COMPARATOR);
//Compare
assertCheck();
}
private void flush(int storeFilessize) throws IOException {
flushStore(store, id++);
assertEquals(storeFilessize, this.store.getStorefiles().size());
assertEquals(0, ((AbstractMemStore)this.store.memstore).getActive().getCellsCount());
}
private void assertCheck() {
assertEquals(expected.size(), result.size());
for(int i=0; i<expected.size(); i++) {
assertEquals(expected.get(i), result.get(i));
}
}
@After
public void tearDown() throws Exception {
EnvironmentEdgeManagerTestHelper.reset();
if (store != null) {
try {
store.close();
} catch (IOException e) {
}
store = null;
}
if (region != null) {
region.close();
region = null;
}
}
@AfterClass
public static void tearDownAfterClass() throws IOException {
TEST_UTIL.cleanupTestDir();
}
@Test
public void testHandleErrorsInFlush() throws Exception {
LOG.info("Setting up a faulty file system that cannot write");
final Configuration conf = HBaseConfiguration.create(TEST_UTIL.getConfiguration());
User user = User.createUserForTesting(conf,
"testhandleerrorsinflush", new String[]{"foo"});
// Inject our faulty LocalFileSystem
conf.setClass("fs.file.impl", FaultyFileSystem.class,
FileSystem.class);
user.runAs(new PrivilegedExceptionAction<Object>() {
@Override
public Object run() throws Exception {
// Make sure it worked (above is sensitive to caching details in hadoop core)
FileSystem fs = FileSystem.get(conf);
assertEquals(FaultyFileSystem.class, fs.getClass());
// Initialize region
init(name.getMethodName(), conf);
LOG.info("Adding some data");
store.add(new KeyValue(row, family, qf1, 1, (byte[])null), null);
store.add(new KeyValue(row, family, qf2, 1, (byte[])null), null);
store.add(new KeyValue(row, family, qf3, 1, (byte[])null), null);
LOG.info("Before flush, we should have no files");
Collection<StoreFileInfo> files =
store.getRegionFileSystem().getStoreFiles(store.getColumnFamilyName());
assertEquals(0, files != null ? files.size() : 0);
//flush
try {
LOG.info("Flushing");
flush(1);
fail("Didn't bubble up IOE!");
} catch (IOException ioe) {
assertTrue(ioe.getMessage().contains("Fault injected"));
}
LOG.info("After failed flush, we should still have no files!");
files = store.getRegionFileSystem().getStoreFiles(store.getColumnFamilyName());
assertEquals(0, files != null ? files.size() : 0);
store.getHRegion().getWAL().close();
return null;
}
});
FileSystem.closeAllForUGI(user.getUGI());
}
/**
* Faulty file system that will fail if you write past its fault position the FIRST TIME
* only; thereafter it will succeed. Used by {@link TestHRegion} too.
*/
static class FaultyFileSystem extends FilterFileSystem {
List<SoftReference<FaultyOutputStream>> outStreams = new ArrayList<>();
private long faultPos = 200;
AtomicBoolean fault = new AtomicBoolean(true);
public FaultyFileSystem() {
super(new LocalFileSystem());
LOG.info("Creating faulty!");
}
@Override
public FSDataOutputStream create(Path p) throws IOException {
return new FaultyOutputStream(super.create(p), faultPos, fault);
}
@Override
public FSDataOutputStream create(Path f, FsPermission permission,
boolean overwrite, int bufferSize, short replication, long blockSize,
Progressable progress) throws IOException {
return new FaultyOutputStream(super.create(f, permission,
overwrite, bufferSize, replication, blockSize, progress), faultPos, fault);
}
@Override
public FSDataOutputStream createNonRecursive(Path f, boolean overwrite,
int bufferSize, short replication, long blockSize, Progressable progress)
throws IOException {
// Fake it. Call create instead. The default implementation throws an IOE
// that this is not supported.
return create(f, overwrite, bufferSize, replication, blockSize, progress);
}
}
static class FaultyOutputStream extends FSDataOutputStream {
volatile long faultPos = Long.MAX_VALUE;
private final AtomicBoolean fault;
public FaultyOutputStream(FSDataOutputStream out, long faultPos, final AtomicBoolean fault)
throws IOException {
super(out, null);
this.faultPos = faultPos;
this.fault = fault;
}
@Override
public synchronized void write(byte[] buf, int offset, int length) throws IOException {
LOG.info("faulty stream write at pos " + getPos());
injectFault();
super.write(buf, offset, length);
}
private void injectFault() throws IOException {
if (this.fault.get() && getPos() >= faultPos) {
throw new IOException("Fault injected");
}
}
}
private static void flushStore(HStore store, long id) throws IOException {
StoreFlushContext storeFlushCtx = store.createFlushContext(id, FlushLifeCycleTracker.DUMMY);
storeFlushCtx.prepare();
storeFlushCtx.flushCache(Mockito.mock(MonitoredTask.class));
storeFlushCtx.commit(Mockito.mock(MonitoredTask.class));
}
/**
* Generate a list of KeyValues for testing based on given parameters
* @return the rows key-value list
*/
private List<Cell> getKeyValueSet(long[] timestamps, int numRows,
byte[] qualifier, byte[] family) {
List<Cell> kvList = new ArrayList<>();
for (int i=1;i<=numRows;i++) {
byte[] b = Bytes.toBytes(i);
for (long timestamp: timestamps) {
kvList.add(new KeyValue(b, family, qualifier, timestamp, b));
}
}
return kvList;
}
/**
* Test to ensure correctness when using Stores with multiple timestamps
*/
@Test
public void testMultipleTimestamps() throws IOException {
int numRows = 1;
long[] timestamps1 = new long[] {1,5,10,20};
long[] timestamps2 = new long[] {30,80};
init(this.name.getMethodName());
List<Cell> kvList1 = getKeyValueSet(timestamps1,numRows, qf1, family);
for (Cell kv : kvList1) {
this.store.add(kv, null);
}
flushStore(store, id++);
List<Cell> kvList2 = getKeyValueSet(timestamps2,numRows, qf1, family);
for(Cell kv : kvList2) {
this.store.add(kv, null);
}
List<Cell> result;
Get get = new Get(Bytes.toBytes(1));
get.addColumn(family,qf1);
get.setTimeRange(0,15);
result = HBaseTestingUtility.getFromStoreFile(store, get);
assertTrue(result.size()>0);
get.setTimeRange(40,90);
result = HBaseTestingUtility.getFromStoreFile(store, get);
assertTrue(result.size()>0);
get.setTimeRange(10,45);
result = HBaseTestingUtility.getFromStoreFile(store, get);
assertTrue(result.size()>0);
get.setTimeRange(80,145);
result = HBaseTestingUtility.getFromStoreFile(store, get);
assertTrue(result.size()>0);
get.setTimeRange(1,2);
result = HBaseTestingUtility.getFromStoreFile(store, get);
assertTrue(result.size()>0);
get.setTimeRange(90,200);
result = HBaseTestingUtility.getFromStoreFile(store, get);
assertTrue(result.size()==0);
}
/**
* Test for HBASE-3492 - Test split on empty colfam (no store files).
*
* @throws IOException When the IO operations fail.
*/
@Test
public void testSplitWithEmptyColFam() throws IOException {
init(this.name.getMethodName());
assertFalse(store.getSplitPoint().isPresent());
}
@Test
public void testStoreUsesConfigurationFromHcdAndHtd() throws Exception {
final String CONFIG_KEY = "hbase.regionserver.thread.compaction.throttle";
long anyValue = 10;
// We'll check that it uses correct config and propagates it appropriately by going thru
// the simplest "real" path I can find - "throttleCompaction", which just checks whether
// a number we pass in is higher than some config value, inside compactionPolicy.
Configuration conf = HBaseConfiguration.create();
conf.setLong(CONFIG_KEY, anyValue);
init(name.getMethodName() + "-xml", conf);
assertTrue(store.throttleCompaction(anyValue + 1));
assertFalse(store.throttleCompaction(anyValue));
// HTD overrides XML.
--anyValue;
init(name.getMethodName() + "-htd", conf, TableDescriptorBuilder
.newBuilder(TableName.valueOf(table)).setValue(CONFIG_KEY, Long.toString(anyValue)),
ColumnFamilyDescriptorBuilder.of(family));
assertTrue(store.throttleCompaction(anyValue + 1));
assertFalse(store.throttleCompaction(anyValue));
// HCD overrides them both.
--anyValue;
init(name.getMethodName() + "-hcd", conf,
TableDescriptorBuilder.newBuilder(TableName.valueOf(table)).setValue(CONFIG_KEY,
Long.toString(anyValue)),
ColumnFamilyDescriptorBuilder.newBuilder(family).setValue(CONFIG_KEY, Long.toString(anyValue))
.build());
assertTrue(store.throttleCompaction(anyValue + 1));
assertFalse(store.throttleCompaction(anyValue));
}
public static class DummyStoreEngine extends DefaultStoreEngine {
public static DefaultCompactor lastCreatedCompactor = null;
@Override
protected void createComponents(Configuration conf, HStore store, CellComparator comparator)
throws IOException {
super.createComponents(conf, store, comparator);
lastCreatedCompactor = this.compactor;
}
}
@Test
public void testStoreUsesSearchEngineOverride() throws Exception {
Configuration conf = HBaseConfiguration.create();
conf.set(StoreEngine.STORE_ENGINE_CLASS_KEY, DummyStoreEngine.class.getName());
init(this.name.getMethodName(), conf);
assertEquals(DummyStoreEngine.lastCreatedCompactor,
this.store.storeEngine.getCompactor());
}
private void addStoreFile() throws IOException {
HStoreFile f = this.store.getStorefiles().iterator().next();
Path storedir = f.getPath().getParent();
long seqid = this.store.getMaxSequenceId().orElse(0L);
Configuration c = TEST_UTIL.getConfiguration();
FileSystem fs = FileSystem.get(c);
HFileContext fileContext = new HFileContextBuilder().withBlockSize(BLOCKSIZE_SMALL).build();
StoreFileWriter w = new StoreFileWriter.Builder(c, new CacheConfig(c),
fs)
.withOutputDir(storedir)
.withFileContext(fileContext)
.build();
w.appendMetadata(seqid + 1, false);
w.close();
LOG.info("Added store file:" + w.getPath());
}
private void archiveStoreFile(int index) throws IOException {
Collection<HStoreFile> files = this.store.getStorefiles();
HStoreFile sf = null;
Iterator<HStoreFile> it = files.iterator();
for (int i = 0; i <= index; i++) {
sf = it.next();
}
store.getRegionFileSystem().removeStoreFiles(store.getColumnFamilyName(), Lists.newArrayList(sf));
}
private void closeCompactedFile(int index) throws IOException {
Collection<HStoreFile> files =
this.store.getStoreEngine().getStoreFileManager().getCompactedfiles();
HStoreFile sf = null;
Iterator<HStoreFile> it = files.iterator();
for (int i = 0; i <= index; i++) {
sf = it.next();
}
sf.closeStoreFile(true);
store.getStoreEngine().getStoreFileManager().removeCompactedFiles(Lists.newArrayList(sf));
}
@Test
public void testRefreshStoreFiles() throws Exception {
init(name.getMethodName());
assertEquals(0, this.store.getStorefilesCount());
// Test refreshing store files when no store files are there
store.refreshStoreFiles();
assertEquals(0, this.store.getStorefilesCount());
// add some data, flush
this.store.add(new KeyValue(row, family, qf1, 1, (byte[])null), null);
flush(1);
assertEquals(1, this.store.getStorefilesCount());
// add one more file
addStoreFile();
assertEquals(1, this.store.getStorefilesCount());
store.refreshStoreFiles();
assertEquals(2, this.store.getStorefilesCount());
// add three more files
addStoreFile();
addStoreFile();
addStoreFile();
assertEquals(2, this.store.getStorefilesCount());
store.refreshStoreFiles();
assertEquals(5, this.store.getStorefilesCount());
closeCompactedFile(0);
archiveStoreFile(0);
assertEquals(5, this.store.getStorefilesCount());
store.refreshStoreFiles();
assertEquals(4, this.store.getStorefilesCount());