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[SPARK-14628][CORE][FOLLLOW-UP] Always tracking read/write metrics
## What changes were proposed in this pull request? This PR is a follow up for #12417, now we always track input/output/shuffle metrics in spark JSON protocol and status API. Most of the line changes are because of re-generating the gold answer for `HistoryServerSuite`, and we add a lot of 0 values for read/write metrics. ## How was this patch tested? existing tests. Author: Wenchen Fan <wenchen@databricks.com> Closes #12462 from cloud-fan/follow.
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