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Moved MultivariateGaussian utility class
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tgaloppo committed Dec 12, 2014
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/*
* Licensed to the Apache Software Foundation (ASF) under one or more
* contributor license agreements. See the NOTICE file distributed with
* this work for additional information regarding copyright ownership.
* The ASF licenses this file to You under the Apache License, Version 2.0
* (the "License"); you may not use this file except in compliance with
* the License. You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/

package org.apache.spark.mllib.stat.impl

import breeze.linalg.{DenseVector => BreezeVector, DenseMatrix => BreezeMatrix}
import breeze.linalg.{Transpose, det, inv}

/**
* Utility class to implement the density function for multivariate Gaussian distribution.
* Breeze provides this functionality, but it requires the Apache Commons Math library,
* so this class is here so-as to not introduce a new dependency in Spark.
*/
private[mllib] class MultivariateGaussian(
val mu: BreezeVector[Double],
val sigma: BreezeMatrix[Double]) extends Serializable {
private val sigmaInv2 = inv(sigma) * -0.5
private val U = math.pow(2.0 * math.Pi, -mu.length / 2.0) * math.pow(det(sigma), -0.5)

def pdf(x: BreezeVector[Double]): Double = {
val delta = x - mu
val deltaTranspose = new Transpose(delta)
U * math.exp(deltaTranspose * sigmaInv2 * delta)
}
}

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