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ENCODE_CRISPR_data
ENCODE_CRISPR_data PublicRe-analyze and harmonize Gasperini et al., 2019, Schraivogel et al., 2020 and Nasser et al., 2021 data for ENCODE distal regulation E-G benchmarking
R 3
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ENCODE_eg_correlation_predictors
ENCODE_eg_correlation_predictors PublicCompute correlation between chromatin accessibility at cCREs and accessibility at promoters or observed gene expression.
R 1
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CRISPRiScreen
CRISPRiScreen PublicAnalysis pipeline to identify enhancer-target gene interactions from TAP-seq or Perturb-seq experiments.
R 2
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