typo

arq5x · Mar 19, 2015 · 1d89bb7 · 1d89bb7
1 parent 492873d
commit 1d89bb7
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/docs/index.rst b/docs/index.rst
@@ -27,8 +27,8 @@ A workflow for the above steps is given below.
   # setup
   VCF=/path/to/my.vcf
   NORMVCF=/path/to/my.norm.vcf
-  $REF=/path/to/human.b37.fasta
-  $SNPEFFJAR=/path/to/snpEff.jar
+  REF=/path/to/human.b37.fasta
+  SNPEFFJAR=/path/to/snpEff.jar
 
   # decompose, normalize and annotate VCF with snpEff.
   # NOTE: can also swap snpEff with VEP