Merge pull request #109 from Phelimb/master

Log errors to stderr not stdout
arq5x · Dec 9, 2016 · beb22ad · beb22ad
2 parents b16ed1a + 1369375
commit beb22ad
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/poretools/Fast5File.py b/poretools/Fast5File.py
@@ -538,7 +538,7 @@ def get_duration(self):
 			try:
 				return int(node.attrs['duration']) / self.get_sample_frequency()
 			except Exception, e:
-				print e
+				logger.error(str(e))
 				pass
 
 		node = self.find_event_timing_block()
@@ -562,7 +562,7 @@ def get_start_time(self):
 				frequency = int(self.get_sample_frequency())
 				return int(exp_start_time) + int(node.attrs['start_time'] / frequency)
 			except Exception, e:
-				print e
+				logger.error(str(e))
 				pass
 
 		node = self.find_event_timing_block()