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Reproducing FactorFinder and cohesin extrusion analyses

License: MIT

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This code repository contains all code needed to reproduce the results in Sept, et al. 2023.

Here's a graphical overview of our main findings from this paper: image

To learn more about this project, click on this link to access our manuscript: LINK

Workflow

To reproduce the results, start at the Protocol RMD file, then move through the figure files. Note that the MD files provide a more readable representation of these RMD files if you're interested in looking through the code but not running it.

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Code repository to reproduce all results for Sept, et al. 2023

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