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fixed SyntaxError: Non-ASCII character
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asntech committed Dec 21, 2017
1 parent 576abf7 commit 279d23a
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Showing 3 changed files with 9 additions and 8 deletions.
4 changes: 2 additions & 2 deletions docs/conf.py
Expand Up @@ -59,9 +59,9 @@
# built documents.
#
# The short X.Y version.
version = '0.6.1'
version = '0.6.2'
# The full version, including alpha/beta/rc tags.
release = 'v0.6.1'
release = 'v0.6.2'

# The language for content autogenerated by Sphinx. Refer to documentation
# for a list of supported languages.
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2 changes: 1 addition & 1 deletion intervene/__init__.py
@@ -1 +1 @@
__version__ = '0.6.1'
__version__ = '0.6.2'
11 changes: 6 additions & 5 deletions intervene/intervene
@@ -1,4 +1,5 @@
#!/usr/bin/env python
# -*- coding: utf-8 -*-
"""
Intervene: a tool for intersection and visualization of multiple genomic region sets
Created on January 10, 2017
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venn_parser.add_argument('--filenames', action='store_true', default=False,
help='Use file names as labels instead. '
'Default is "%(default)s"\n\n')

venn_parser.add_argument('--bedtools-options', dest='bedtools_options',
help='List any of the arguments available for bedtool’s intersect command.\nType bedtools intersect --help to view all the options.\n'
'For example: --bedtools-options f=0.8,r,etc\n\n')
help='List any of the arguments available for bedtools intersect command.\nType bedtools intersect --help to view all the options.\n'
'For example: --bedtools-options f=0.8,r,etc\n\n')

venn_parser.add_argument('-o', '--output', dest='output',
help='Output folder path where results will be stored. '
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'Default is "%(default)s".\n\n')

upset_parser.add_argument('--bedtools-options', dest='bedtools_options',
help='List any of the arguments available for bedtool’s intersect command.\nType bedtools intersect --help to view all the options.\n'
help='List any of the arguments available for bedtools intersect command.\nType bedtools intersect --help to view all the options.\n'
'For example: --bedtools-options f=0.8,r,etc\n\n')

upset_parser.add_argument('-o', '--output', dest='output',
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'Note: For jaccard and reldist regions should be pre-shorted or set --sort.\n\n')

pairwise_parser.add_argument('--bedtools-options', dest='bedtools_options',
help='List any of the arguments available for bedtool’s subcommands: interset, jaccard, fisher, reldist.\nType bedtools <subcommand> --help to view all the options.\n'
help='List any of the arguments available for bedtools subcommands: interset, jaccard, fisher, reldist.\nType bedtools <subcommand> --help to view all the options.\n'
'For example: --bedtools-options f=0.8,r,etc\n\n')

pairwise_parser.add_argument('--corr', action='store_true', default=False,
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