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Fisher test requires genome name
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asntech committed Aug 8, 2017
1 parent 88add67 commit 6fa103b
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion intervene/intervene
Expand Up @@ -345,7 +345,7 @@ def main():

#================== Run Pairwise module ================#
if options.command =='pairwise':
if options.type == 'fisher':
if options.compute == 'fisher':
if not options.genome:
sys.stderr.write('Fisher test requires genome name. Please set the --genome argument.\nType --help or read documentation for more details - http://intervene.readthedocs.io\n')
sys.exit(1)
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