Skip to content

Commit

Permalink
working on sequence stuff, dyn programming fixed
Browse files Browse the repository at this point in the history
  • Loading branch information
Greg Borenstein committed Nov 5, 2012
1 parent c96d839 commit c051d47
Show file tree
Hide file tree
Showing 20 changed files with 19 additions and 19 deletions.
Binary file not shown.
Binary file modified distribution/DynamicProgramming-1/download/DynamicProgramming.zip
Binary file not shown.
Expand Up @@ -2,7 +2,7 @@
<!--NewPage-->
<HTML>
<HEAD>
<!-- Generated by javadoc (build 1.6.0_33) on Mon Nov 05 04:40:26 EST 2012 -->
<!-- Generated by javadoc (build 1.6.0_33) on Mon Nov 05 04:42:08 EST 2012 -->
<TITLE>
All Classes (Javadocs: DynamicProgramming)
</TITLE>
Expand Down
Expand Up @@ -2,7 +2,7 @@
<!--NewPage-->
<HTML>
<HEAD>
<!-- Generated by javadoc (build 1.6.0_33) on Mon Nov 05 04:40:26 EST 2012 -->
<!-- Generated by javadoc (build 1.6.0_33) on Mon Nov 05 04:42:08 EST 2012 -->
<TITLE>
All Classes (Javadocs: DynamicProgramming)
</TITLE>
Expand Down
Expand Up @@ -2,7 +2,7 @@
<!--NewPage-->
<HTML>
<HEAD>
<!-- Generated by javadoc (build 1.6.0_33) on Mon Nov 05 04:40:25 EST 2012 -->
<!-- Generated by javadoc (build 1.6.0_33) on Mon Nov 05 04:42:07 EST 2012 -->
<TITLE>
Constant Field Values (Javadocs: DynamicProgramming)
</TITLE>
Expand Down
Expand Up @@ -2,7 +2,7 @@
<!--NewPage-->
<HTML>
<HEAD>
<!-- Generated by javadoc (build 1.6.0_33) on Mon Nov 05 04:40:25 EST 2012 -->
<!-- Generated by javadoc (build 1.6.0_33) on Mon Nov 05 04:42:08 EST 2012 -->
<TITLE>
Deprecated List (Javadocs: DynamicProgramming)
</TITLE>
Expand Down
Expand Up @@ -2,7 +2,7 @@
<!--NewPage-->
<HTML>
<HEAD>
<!-- Generated by javadoc (build 1.6.0_33) on Mon Nov 05 04:40:15 EST 2012 -->
<!-- Generated by javadoc (build 1.6.0_33) on Mon Nov 05 04:42:04 EST 2012 -->
<TITLE>
Cell (Javadocs: DynamicProgramming)
</TITLE>
Expand Down
Expand Up @@ -2,7 +2,7 @@
<!--NewPage-->
<HTML>
<HEAD>
<!-- Generated by javadoc (build 1.6.0_33) on Mon Nov 05 04:40:23 EST 2012 -->
<!-- Generated by javadoc (build 1.6.0_33) on Mon Nov 05 04:42:06 EST 2012 -->
<TITLE>
DynamicProgramming (Javadocs: DynamicProgramming)
</TITLE>
Expand Down
Expand Up @@ -2,7 +2,7 @@
<!--NewPage-->
<HTML>
<HEAD>
<!-- Generated by javadoc (build 1.6.0_33) on Mon Nov 05 04:40:23 EST 2012 -->
<!-- Generated by javadoc (build 1.6.0_33) on Mon Nov 05 04:42:06 EST 2012 -->
<TITLE>
LongestCommonSubsequence (Javadocs: DynamicProgramming)
</TITLE>
Expand Down
Expand Up @@ -2,7 +2,7 @@
<!--NewPage-->
<HTML>
<HEAD>
<!-- Generated by javadoc (build 1.6.0_33) on Mon Nov 05 04:40:23 EST 2012 -->
<!-- Generated by javadoc (build 1.6.0_33) on Mon Nov 05 04:42:07 EST 2012 -->
<TITLE>
SeamCarving (Javadocs: DynamicProgramming)
</TITLE>
Expand Down
Expand Up @@ -2,7 +2,7 @@
<!--NewPage-->
<HTML>
<HEAD>
<!-- Generated by javadoc (build 1.6.0_33) on Mon Nov 05 04:40:24 EST 2012 -->
<!-- Generated by javadoc (build 1.6.0_33) on Mon Nov 05 04:42:07 EST 2012 -->
<TITLE>
SequenceAlignment (Javadocs: DynamicProgramming)
</TITLE>
Expand Down
Expand Up @@ -2,7 +2,7 @@
<!--NewPage-->
<HTML>
<HEAD>
<!-- Generated by javadoc (build 1.6.0_33) on Mon Nov 05 04:40:24 EST 2012 -->
<!-- Generated by javadoc (build 1.6.0_33) on Mon Nov 05 04:42:07 EST 2012 -->
<TITLE>
SmithWaterman (Javadocs: DynamicProgramming)
</TITLE>
Expand Down
Expand Up @@ -2,7 +2,7 @@
<!--NewPage-->
<HTML>
<HEAD>
<!-- Generated by javadoc (build 1.6.0_33) on Mon Nov 05 04:40:25 EST 2012 -->
<!-- Generated by javadoc (build 1.6.0_33) on Mon Nov 05 04:42:07 EST 2012 -->
<TITLE>
dynamicprogramming (Javadocs: DynamicProgramming)
</TITLE>
Expand Down
Expand Up @@ -2,7 +2,7 @@
<!--NewPage-->
<HTML>
<HEAD>
<!-- Generated by javadoc (build 1.6.0_33) on Mon Nov 05 04:40:25 EST 2012 -->
<!-- Generated by javadoc (build 1.6.0_33) on Mon Nov 05 04:42:07 EST 2012 -->
<TITLE>
dynamicprogramming (Javadocs: DynamicProgramming)
</TITLE>
Expand Down
Expand Up @@ -2,7 +2,7 @@
<!--NewPage-->
<HTML>
<HEAD>
<!-- Generated by javadoc (build 1.6.0_33) on Mon Nov 05 04:40:25 EST 2012 -->
<!-- Generated by javadoc (build 1.6.0_33) on Mon Nov 05 04:42:07 EST 2012 -->
<TITLE>
dynamicprogramming Class Hierarchy (Javadocs: DynamicProgramming)
</TITLE>
Expand Down
2 changes: 1 addition & 1 deletion distribution/DynamicProgramming-1/reference/help-doc.html
Expand Up @@ -2,7 +2,7 @@
<!--NewPage-->
<HTML>
<HEAD>
<!-- Generated by javadoc (build 1.6.0_33) on Mon Nov 05 04:40:26 EST 2012 -->
<!-- Generated by javadoc (build 1.6.0_33) on Mon Nov 05 04:42:08 EST 2012 -->
<TITLE>
API Help (Javadocs: DynamicProgramming)
</TITLE>
Expand Down
2 changes: 1 addition & 1 deletion distribution/DynamicProgramming-1/reference/index-all.html
Expand Up @@ -2,7 +2,7 @@
<!--NewPage-->
<HTML>
<HEAD>
<!-- Generated by javadoc (build 1.6.0_33) on Mon Nov 05 04:40:25 EST 2012 -->
<!-- Generated by javadoc (build 1.6.0_33) on Mon Nov 05 04:42:07 EST 2012 -->
<TITLE>
Index (Javadocs: DynamicProgramming)
</TITLE>
Expand Down
2 changes: 1 addition & 1 deletion distribution/DynamicProgramming-1/reference/index.html
Expand Up @@ -2,7 +2,7 @@
<!--NewPage-->
<HTML>
<HEAD>
<!-- Generated by javadoc on Mon Nov 05 04:40:26 EST 2012-->
<!-- Generated by javadoc on Mon Nov 05 04:42:08 EST 2012-->
<TITLE>
Javadocs: DynamicProgramming
</TITLE>
Expand Down
Expand Up @@ -2,7 +2,7 @@
<!--NewPage-->
<HTML>
<HEAD>
<!-- Generated by javadoc (build 1.6.0_33) on Mon Nov 05 04:40:25 EST 2012 -->
<!-- Generated by javadoc (build 1.6.0_33) on Mon Nov 05 04:42:07 EST 2012 -->
<TITLE>
Class Hierarchy (Javadocs: DynamicProgramming)
</TITLE>
Expand Down
4 changes: 2 additions & 2 deletions src/dynamicprogramming/DynamicProgramming.java
Expand Up @@ -110,8 +110,8 @@ protected abstract void fillInCell(Cell currentCell, Cell cellAbove,
Cell cellToLeft, Cell cellAboveLeft, Cell cellAboveRight);

protected void fillIn() {
for (int row = 1; row < scoreTable.length; row++) {
for (int col = 1; col < scoreTable[row].length; col++) {
for (int row = 0; row < scoreTable.length; row++) {
for (int col = 0; col < scoreTable[row].length; col++) {

Cell currentCell = scoreTable[row][col];
if(col == scoreTable[row].length-1){
Expand Down

0 comments on commit c051d47

Please sign in to comment.