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aamod_fsl_robustFOV.xml
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aamod_fsl_robustFOV.xml
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<?xml version="1.0" encoding="utf-8"?>
<aap>
<tasklist>
<currenttask domain='subject' desc='Use the FSL robustFOV tool' modality='MRI'>
<qsub>
<timeBase>0.15</timeBase>
<memoryBase>0.5</memoryBase>
</qsub>
<permanenceofoutput>2</permanenceofoutput>
<inputstreams>
<stream>structural</stream>
</inputstreams>
<outputstreams>
<stream>structural</stream>
</outputstreams>
<!-- This specifies which structural (or other image) we want to use, typically the first, but can be changed
Can add multiple, but then only first one will be used for BETting, but operation will be applied on both -->
<structural>1</structural>
<FOVsize desc='Size in millimeters from base to top of brain (larger to remove less)'
>150</FOVsize>
<!-- Diagnostic videos? -->
<diagnostic>0</diagnostic>
</currenttask>
</tasklist>
</aap>