Merge pull request #19 from tiborauer/devel

DEBUG: secondlevel threshold without structural can find template
automaticanalysis · Jun 14, 2018 · 8dd2f3e · 8dd2f3e
2 parents f2c639c + 710ef99
commit 8dd2f3e
Showing 1 changed file with 5 additions and 2 deletions.
diff --git a/aa_modules/aamod_secondlevel_threshold.m b/aa_modules/aamod_secondlevel_threshold.m
@@ -78,9 +78,12 @@
                 end
             end
         else  % Template
-            aas_log(aap,false,'WARNING: Structural cannot be loaded! Template will be used...');
+           aas_log(aap,false,'Structural cannot be loaded! Template will be used...');
             tmpfile = aap.directory_conventions.T1template;
-            if ~exist(tmpfile,'file') && (tmpfile(1) ~= '/'), tmpfile = fullfile(fileparts(which('spm')),tmpfile); end
+            if tmpfile(1) ~= '/'
+                if exist(tmpfile,'file'), tmpfile = which(tmpfile);
+                else tmpfile = fullfile(fileparts(which('spm')),tmpfile); end
+            end
         end
 
         Vtemplate=spm_vol(tmpfile); if iscell(Vtemplate), Vtemplate = cell2mat(Vtemplate); end