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loadCalculatorOutputIntoDB
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loadCalculatorOutputIntoDB
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#!/usr/bin/env node
/* eslint no-console: 0, no-await-in-loop: 0 */
const { isAbsolute, join } = require('path');
const { existsSync, readFileSync, createReadStream } = require('fs');
const _ = require('lodash');
const split2 = require('split2');
const through2 = require('through2');
const copyFrom = require('pg-copy-streams').from;
const { NDJSON } = require('./src/enums/outputFileFormats');
const { EAV } = require('./src/enums/outputFormats');
const DBService = require('./src/storage/services/DBService');
const calculatorOutputDir = process.argv[2];
if (!calculatorOutputDir) {
console.error(
'ERROR: The calculator output directory path must be specified as the 1st cli argument.'
);
process.exit(1);
}
const calculatorOutputDirPath = isAbsolute(calculatorOutputDir)
? calculatorOutputDir
: join(process.cwd(), calculatorOutputDir);
if (!existsSync(calculatorOutputDirPath)) {
console.error(
`ERROR: The specified calculator output directory ${calculatorOutputDirPath} does not exist.`
);
process.exit(1);
}
const calculatorMetadataPath = join(
calculatorOutputDirPath,
'calculator_metadata.json'
);
if (!existsSync(calculatorMetadataPath)) {
console.error(
`ERROR: ${calculatorOutputDirPath} does not contain a calculator_metadata.json file.`
);
process.exit(1);
}
const calculatorMetadata = JSON.parse(
readFileSync(calculatorMetadataPath, {
encoding: 'utf8'
})
);
if (calculatorMetadata.calculatorSettings.outputFileFormat !== NDJSON) {
console.error(
'ERROR: The loader requires the calculator was run with --outputFileFormat=NDJSON'
);
process.exit(1);
}
if (calculatorMetadata.calculatorSettings.outputFormat !== EAV) {
console.error(
'ERROR: The loader requires the calculator was run with --outputFormat=EAV'
);
process.exit(1);
}
const { calculators: pm3MeasureCalculatorsMetadata } = calculatorMetadata;
const insertPM3CalculatorMetadata = async () => {
const metadata = _.cloneDeep(calculatorMetadata);
metadata.calculators.forEach(cMeta => {
/* eslint-disable-next-line no-param-reassign */
delete cMeta.outputFileName;
});
const {
rows: [{ id }]
} = await DBService.query(
'INSERT INTO public.pm3_calculator_metadata (metadata) VALUES ($1) RETURNING id',
[metadata]
);
return id;
};
// NOTE: Will cascade and clean up pm3_measure_calculator_metadata and pm3_eav_append_only as well.
const deletePM3CalculatorMetadata = pm3calc_id =>
DBService.query('DELETE FROM public.pm3_calculator_metadata WHERE id = $1', [
pm3calc_id
]);
const insertPM3MeasureCalculatorsMetadata = async pm3calc_id => {
const pm3meacalc_ids = [];
const client = await DBService.pool.connect();
try {
await client.query('BEGIN');
for (let i = 0; i < pm3MeasureCalculatorsMetadata.length; ++i) {
const metadata = pm3MeasureCalculatorsMetadata[i];
const {
rows: [{ id }]
} = await client.query(
'INSERT INTO public.pm3_measure_calculator_metadata (pm3calc_id, metadata) VALUES ($1, $2) RETURNING id',
[pm3calc_id, _.omit(metadata, 'outputFileName')]
);
pm3meacalc_ids.push(id);
}
await client.query('COMMIT');
return pm3meacalc_ids;
} catch (err) {
await client.query('ROLLBACK');
throw err;
} finally {
await client.release();
}
};
const loadMetadata = async (metadataType, pm3calc_id, metadataFileName) => {
if (!metadataFileName) {
return;
}
const outputFilePath = join(calculatorOutputDir, metadataFileName);
if (existsSync(outputFilePath)) {
const client = await DBService.pool.connect();
const pseudoMetadata = {
measure: metadataType,
year: calculatorMetadata.calculatorSettings.year,
isCanonical: true
};
try {
const {
rows: [{ id }]
} = await client.query(
'INSERT INTO public.pm3_measure_calculator_metadata (pm3calc_id, metadata) VALUES ($1, $2) RETURNING id',
[pm3calc_id, pseudoMetadata]
);
await new Promise(async (resolve, reject) => {
const dataStream = createReadStream(outputFilePath)
.on('error', reject)
.pipe(split2(JSON.parse)) // https://github.com/mcollina/split2#ndj---newline-delimited-json
.pipe(
through2.obj(function ndjsonTransformer(
{ tmc, attribute, value },
$,
cb
) {
const v = typeof value === 'string' ? `"""${value}"""` : value;
const row = `${id},"${tmc}","${attribute}",${v}`;
this.push(Buffer.from(`${row}\n`));
cb();
})
);
const copyStream = client.query(
copyFrom(
'COPY public.pm3_eav_append_only (pm3meacalc_id, tmc, attribute, value) FROM STDIN WITH CSV'
)
);
dataStream.on('error', reject);
copyStream.on('error', reject);
copyStream.on('end', resolve);
dataStream.pipe(copyStream);
});
} catch (err) {
throw err;
} finally {
await client.release();
}
} else {
throw new Error(
`ERROR: measure file ${outputFilePath} is missing from the outputDir`
);
}
};
const loadTmcMetadata = loadMetadata.bind(null, 'TMC_METADATA');
const loadRisMetadata = loadMetadata.bind(null, 'RIS_METADATA');
const loadCalculatorsEAVOutput = async pm3meacalc_ids =>
Promise.all(
pm3meacalc_ids.map(async (pm3meacalc_id, i) => {
const metadata = pm3MeasureCalculatorsMetadata[i];
const { outputFileName } = metadata;
const outputFilePath = join(calculatorOutputDir, outputFileName);
if (existsSync(outputFilePath)) {
const client = await DBService.pool.connect();
try {
await new Promise(async (resolve, reject) => {
const dataStream = createReadStream(outputFilePath)
.on('error', reject)
.pipe(split2(JSON.parse)) // https://github.com/mcollina/split2#ndj---newline-delimited-json
.pipe(
through2.obj(function ndjsonTransformer(
{ tmc, attribute, value },
$,
cb
) {
const v =
typeof value === 'string' ? `"""${value}"""` : value;
const row = `${pm3meacalc_id},"${tmc}","${attribute}",${v}`;
this.push(Buffer.from(`${row}\n`));
cb();
})
);
const copyStream = client.query(
copyFrom(
'COPY public.pm3_eav_append_only (pm3meacalc_id, tmc, attribute, value) FROM STDIN WITH CSV'
)
);
dataStream.on('error', reject);
copyStream.on('error', reject);
copyStream.on('end', resolve);
dataStream.pipe(copyStream);
});
} catch (err) {
throw err;
} finally {
await client.release();
}
} else {
throw new Error(
`ERROR: measure file ${outputFilePath} is missing from the outputDir`
);
}
})
);
(async () => {
let pm3calc_id;
let pm3meacalc_ids;
const { tmcMetadataFileName, risMetadataFileName } = calculatorMetadata;
try {
pm3calc_id = await insertPM3CalculatorMetadata();
pm3meacalc_ids = await insertPM3MeasureCalculatorsMetadata(pm3calc_id);
await loadTmcMetadata(pm3calc_id, tmcMetadataFileName);
if (!_.isEmpty(risMetadataFileName)) {
await loadRisMetadata(pm3calc_id, risMetadataFileName);
}
await loadCalculatorsEAVOutput(pm3meacalc_ids);
} catch (err) {
// Clean up failed load. DELETE cascades.
await deletePM3CalculatorMetadata(pm3calc_id);
console.error(err.message);
} finally {
DBService.end();
}
})();