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utils.py
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utils.py
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import time
import os
import torch
import numpy as np
import cv2
from matplotlib import pyplot as plt
from shapely.geometry import Polygon
from torchvision.transforms.functional import to_tensor
import torch.nn.functional as F
from pyquaternion import Quaternion
from collections import namedtuple, defaultdict
import src
from src.model.loss import dice_loss_per_class, dice_loss_per_class_infer
# from src.util.box_ops import box_cxcywh_to_xyxy
ObjectDataBEV = namedtuple(
"ObjectData",
["classname", "x_pos", "z_pos", "x_width", "z_height", "visibility", "not_in_grid"],
)
ObjectData3D = namedtuple(
"ObjectData",
["classname",
"x_pos", "y_pos", "z_pos", # object ceter
"width", "height", "length", # object dims
"x1", "x2", "x3", "x4", # object bottom corner x
"z1", "z2", "z3", "z4", # object bottom corner z
"visibility", "not_in_grid"],
# image-plane visibility and within 50m x 50m BEV grid check
)
Object3D = namedtuple(
"ObjectData",
["classname",
"x_pos", "y_pos", "z_pos", # object ceter
"x1", "x2", "x3", "x4", "x5", "x6", "x7", "x8",
"z1", "z2", "z3", "z4",
"visibility", "not_in_grid"],
)
class MetricDict(defaultdict):
def __init__(self):
super().__init__(float)
self.count = defaultdict(int)
def __add__(self, other):
for key, value in other.items():
self[key] += value
self.count[key] += 1
return self
@property
def mean(self):
return {key: self[key] / self.count[key] for key in self.keys()}
class Timer(object):
def __init__(self):
self.total = 0
self.runs = 0
self.t = 0
def reset(self):
self.total = 0
self.runs = 0
self.t = 0
def start(self):
torch.cuda.synchronize()
torch.cuda.synchronize()
self.t = time.perf_counter()
def stop(self):
torch.cuda.synchronize()
torch.cuda.synchronize()
self.total += time.perf_counter() - self.t
self.runs += 1
@property
def mean(self):
val = self.total / self.runs
self.reset()
return val
def merge_classes_lyft(input):
"""
[B, C, H, W] ----> [B, c, H, W]
"""
driv = input[:, 0:1]
vehicles = input[:, 1:]
vehicles_merged = (vehicles.sum(dim=1) > 0).float()
return torch.cat([driv, vehicles_merged.unsqueeze(1)], dim=1)
def mask_to_objpos(mask, skip_classes=4):
"""
:param mask:
:return:
"""
for scale_idx, scale in enumerate(mask):
print("Scale: {}, {}".format(scale_idx, scale.shape))
for batch_idx, batch in enumerate(scale):
print(" Batch: {}, {}".format(batch_idx, batch.shape))
for cls_idx, cls in enumerate(batch):
print(" Class: {}, {}".format(cls_idx, cls.shape))
# read image
# img = cv2.imread('two_blobs.jpg')
# convert to grayscale
# gray = cv2.cvtColor(img, cv2.COLOR_BGR2GRAY)
# threshold
cls = (cls * 255).cpu().numpy().astype(np.uint8)
print(" {}".format(cls.mean()))
thresh = cv2.threshold(cls, 128, 255, cv2.THRESH_BINARY)[1]
# get contours
# result = img.copy()
contours = cv2.findContours(
thresh, cv2.RETR_EXTERNAL, cv2.CHAIN_APPROX_SIMPLE
)
contours = contours[0] if len(contours) == 2 else contours[1]
pos = []
for cntr in contours:
x, y, w, h = cv2.boundingRect(cntr)
# cv2.rectangle(result, (x, y), (x + w, y + h), (0, 0, 255), 2)
# print(x, y, w, h)
pos.append(np.array([x, y, h, w]))
plt.imshow(cls)
plt.title("{},{},{},{}".format(x, y, w, h))
plt.show()
pos = np.array(pos)
print(pos)
def downsample_gt(gt_s1, map_sizes, threshold=0, batch_list=False):
gt_ms = []
gt = gt_s1
if batch_list:
for batch in gt_s1:
batch_ms = []
for size in map_sizes:
gt = F.interpolate(batch.unsqueeze(0), size=size, mode="bilinear")
batch_ms.append((gt.squeeze(0) > threshold).float())
gt_ms.append(batch_ms)
return gt_ms
else:
ndims_gt = len(gt.shape)
for size in map_sizes:
if ndims_gt == 5:
batch_size, t, c, _, _ = gt.shape
# flatten to 4D
gt = gt.flatten(start_dim=0, end_dim=1)
gt = F.interpolate(gt, size=size, mode="bilinear")
# partition back to original dims if originally 5D
gt = gt.unsqueeze(1).view(batch_size, t, c, size[0], size[1])
else:
gt = F.interpolate(gt, size=size, mode="bilinear")
gt_ms.append(gt)
return [(gt > threshold).float() for gt in gt_ms]
def downsample(gt_s1, map_sizes):
gt_ms = []
gt = gt_s1
for size in map_sizes:
gt = F.interpolate(gt, size=size, mode="bilinear")
gt_ms.append(gt)
return gt_ms
def datasets_comparisons(dataloaders):
"""
compare stats of dataloaders
"""
stats_dict = MetricDict()
counter = 0
for batches in zip(*dataloaders):
gt = []
for idx, batch in enumerate(batches):
_, _, _, gt_maps, _, _ = batch
gt_maps = gt_maps.cuda()
gt_s1 = (gt_maps > 0).float()
gt.append(gt_s1)
# gt_ms = downsample_gt(gt_s1, map_sizes)
# Visualise
# gt_ms = downsample_gt(gt_maps, map_sizes)
# vis_ms = downsample_gt(vis_mask, map_sizes)
# gt_map = gt_ms[0][0] * vis_ms[0][0]
#
# class_idx = torch.arange(len(gt_map)) + 1
# gt_vis = gt_map * class_idx.view(-1, 1, 1)
# gt_vis, _ = gt_vis.max(dim=0)
# plt.imshow(gt_vis, vmin=0, vmax=12, cmap="magma")
# plt.title(titles[idx])
# plt.show()
#
# print("wait")
gt0_v_gt1 = (gt[0] != gt[1]).sum(dim=-1).sum(dim=-1).sum(dim=0)
counter += 1
print(counter)
stats = gt0_v_gt1
comp_stats = {"stats": stats}
stats_dict += comp_stats
print("comparison stats:", stats_dict["stats"])
def project_bev2img(grid2d, calib):
g = make_grid3d([50, 50], [-25, 1, 1], 1.0).cuda()
# Convert grid from 2d to 3d
# grid = grid2d.reshape(-1, 2).T # reshape from [X, Z, 2] to [2, X * Z]
print(g[0].max(), g[0].min(), g[2].max(), g[2].min())
# Project grid coords into image
print(calib.shape, g.shape)
uv = torch.matmul(calib, g.double())
print('before', uv[0].max())
uv = uv[:-1] / uv[-1]
print('after', uv[0].max())
return uv
def bev2img(
bev, calib, grid_res, image_h, image_w, grid_x=50, grid_z=50,
grid_x_off=-25, grid_y_off=1, grid_z_off=1
):
"""
project features from BEV to the image-plane
Calibration matrices must be scaled accordingly before passing in
Takes in BEV features [B, C, H, W] and returns them in the image-plane
in a tensor of size [B, C, image_h, image_w]
"""
assert len(bev.shape) == 4, "BEV needs to be of shape [B, C, H, W]"
assert len(calib.shape) == 3, "calib needs to be of shape [B, 3, 3]"
batch_size = bev.shape[0]
# Get mapping indices from BEV to Image
# Create 3D coordinate grid of BEV features
grid = make_grid3d(
grid_size=[grid_x, grid_z],
grid_offset=[grid_x_off, grid_y_off, grid_z_off],
grid_res=grid_res,
) # [3, grid_size]
grid_as_idxs = make_grid3d(
grid_size=[bev.shape[-2], bev.shape[-1]],
grid_offset=[0, 0, 0],
grid_res=1.0,
) # [3, grid_size]
assert grid.shape == grid_as_idxs.shape, "grid shapes need to match"
grid = grid.unsqueeze(0).to(bev.device) # [1, 3, grid_size]
grid_as_idxs = grid_as_idxs.unsqueeze(0).to(bev.device) # [1, 3, grid_size]
# Project grid coordinates to obtain image pixel coordinates
# [B, 3, 3] * [1, 3, grid_size]
UV = torch.matmul(calib.float(), grid.float())
UV = UV[:, :-1] / UV[:, -1].unsqueeze(1) # [B, 2, grid_size]
# Mask out everything outside image
conditions = torch.stack([
UV[:, 0] >= 0, UV[:, 0] < image_w, UV[:, 1] >= 0, UV[:, 1] < image_h
], dim=1) # [B, 4, grid_size]
assert conditions.shape[-1] == grid.shape[-1]
assert len(conditions.shape) == 3
masks = torch.all(conditions, dim=1)
# cycle through every set of UV coords in batch, using same grid to get indices
bev_feats_in_image = []
pos_z_in_image = []
for idx in range(batch_size):
# get uv and BEV coords by appling mask
uv = UV[idx, :, masks[idx]].long()
bev_xyz = grid_as_idxs[0, :, masks[idx]].long()
# Fill in image with BEV features at projected locations
bev_masked = bev[idx, :, bev_xyz[2], bev_xyz[0]]
bev_in_im = torch.zeros(
[bev.shape[1], image_h, image_w], device=bev.device
)
pos_z_in_im = torch.zeros(
[bev.shape[1], image_h, image_w], device=bev.device
)
bev_in_im[..., uv[1], uv[0]] = bev_masked
pos_z_in_im[..., uv[1], uv[0]] = bev_xyz[2].float()
# similarity = (image_w_bev[..., uv[1], uv[0]] == bev_masked).sum() / \
# torch.prod(torch.tensor(bev_masked.shape))
# assert similarity > 0.5, "similarity = {}".format(similarity)
bev_feats_in_image.append(bev_in_im)
pos_z_in_image.append(pos_z_in_im)
# [B, C, image_h, image_w]
return torch.stack(bev_feats_in_image), torch.stack(pos_z_in_image)
def dataloader_vis_mask_stats(dataloader, map_sizes, scales=[1, 2, 4, 8, 16]):
"""
calculate class frequency and class relative size at multiple scales
"""
stats_dict = MetricDict()
print("len dataloader:", len(dataloader))
for i, (_, _, _, _, _, vis_mask) in enumerate(dataloader):
vis_mask = vis_mask.cuda()
gt_s1 = (vis_mask > 0.5).float()
gt_ms = downsample_gt(gt_s1, map_sizes)
# Class size
batch_class_size_ms = [gt.sum(dim=-1).sum(dim=-1).sum(dim=0) for gt in gt_ms]
class_size_ms_keys = ["class_size_s{}".format(scale) for scale in scales]
batch_length = len(vis_mask)
keys = [*class_size_ms_keys, "length"]
vals = [*batch_class_size_ms, batch_length]
batch_stats = {k: v for k, v in zip(keys, vals)}
stats_dict += batch_stats
print(i, batch_length)
n_cells_ms = torch.tensor(
[torch.prod(torch.tensor(map_size)) for map_size in map_sizes]
)
class_size = torch.stack(
[stats_dict["class_size_s{}".format(scale)] for scale in scales]
)
class_count = stats_dict["length"]
relative_class_size = class_size / (class_count * n_cells_ms[:, None].cuda())
print(relative_class_size)
print("done")
def dataloader_class_stats(dataloader, map_sizes, scales=[1, 2, 4, 8, 16]):
"""
calculate class frequency and class relative size at multiple scales
"""
stats_dict = MetricDict()
print("len dataloader:", len(dataloader))
for i, (_, _, _, gt_maps, _, _) in enumerate(dataloader):
gt_maps = gt_maps.cuda()
gt_s1 = (gt_maps > 0).float()
gt_ms = downsample_gt(gt_s1, map_sizes)
# Class frequency
batch_class_count_ms = [count_classes(gt) for gt in gt_ms]
class_count_ms_keys = ["class_count_s{}".format(scale) for scale in scales]
# Class size
batch_class_size_ms = [gt.sum(dim=-1).sum(dim=-1).sum(dim=0) for gt in gt_ms]
class_size_ms_keys = ["class_size_s{}".format(scale) for scale in scales]
batch_length = len(gt_maps)
keys = [*class_count_ms_keys, *class_size_ms_keys, "length"]
vals = [*batch_class_count_ms, *batch_class_size_ms, batch_length]
batch_stats = {k: v for k, v in zip(keys, vals)}
stats_dict += batch_stats
if i % 100 == 0:
print(i)
n_cells_ms = torch.tensor(
[torch.prod(torch.tensor(map_size)) for map_size in map_sizes]
)
class_count = torch.stack(
[stats_dict["class_count_s{}".format(scale)] for scale in scales]
)
class_size = torch.stack(
[stats_dict["class_size_s{}".format(scale)] for scale in scales]
)
class_frequency = class_count / stats_dict["length"]
relative_class_size = class_size / (class_count * n_cells_ms[:, None].cuda())
print(class_frequency)
print(relative_class_size)
print("done")
def dataloader_class_stats_segdet(dataloader, map_sizes=[[200, 200]], n_dyn_classes=8):
"""
calculate class frequency and class relative size at multiple scales
for the maps and objects dataset
"""
stats_dict = src.MetricDict()
dynobj_count = 0
dynobj_pixcount = 0
roadobj_count = 0
roadobj_pixcount = 0
n_samples = 0
for (
i,
(image, calib, roadmaps, grid2d, vis_masks, objlabels, objboxes, objmaps),
) in enumerate(dataloader):
# Move tensors to GPU
roadmaps, vis_masks, objlabels, objmaps = (
roadmaps.cuda(),
vis_masks.cuda(),
[labels.cuda() for labels in objlabels],
[maps.cuda() for maps in objmaps],
)
objmaps = [(maps > 0.5).float() for maps in objmaps]
roadmaps = [(maps > 0.5).float() for maps in roadmaps]
vis_masks = [(mask > 0).float() for mask in vis_masks]
# Up/downsample to set size
objmap_sizes = map_sizes
objmaps = src.utils.downsample_gt(objmaps, objmap_sizes, batch_list=True)
roadmaps = src.utils.downsample_gt(roadmaps, objmap_sizes, batch_list=True)
vis_masks = src.utils.downsample_gt(vis_masks, objmap_sizes, batch_list=True)
# Mask out occluded areas
objmaps = [obj[0] * mask[0] for obj, mask in
zip(objmaps, vis_masks)] # only use 200x200
roadmaps = [road[0] * mask[0] for road, mask in
zip(roadmaps, vis_masks)] # only use 200x200
roadmaps = torch.stack(roadmaps)
# Count classes
obj_onehot = torch.cat(
[F.one_hot(labels, n_dyn_classes) for labels in objlabels],
dim=0
)
obj_count = torch.stack(
[(F.one_hot(labels, n_dyn_classes).sum(0) > 0).float() for labels in
objlabels],
).sum(dim=0)
road_count = (roadmaps.sum(-1).sum(-1) > 0).float().sum(0)
# Count pixels
obj_pixcount = torch.cat([maps.sum(-1).sum(-1) for maps in objmaps], dim=0)
obj_pixcount = obj_onehot * obj_pixcount[:, None]
obj_pixcount = obj_pixcount.sum(dim=0)
road_pixcount = roadmaps.sum(-1).sum(-1).sum(0)
# accumulate
dynobj_count += obj_count.detach()
dynobj_pixcount += obj_pixcount.detach()
roadobj_count += road_count.detach()
roadobj_pixcount += road_pixcount.detach()
n_samples += len(image)
if i % 50 == 0:
print(i, n_samples)
# class frequency
dyn_cf = dynobj_count / n_samples
road_cf = roadobj_count / n_samples
# object size as percentage of map size, only 200x200 in this case
dyn_objsize = dynobj_pixcount / (torch.tensor(map_sizes[0]).prod() * dynobj_count)
road_objsize = roadobj_pixcount / (
torch.tensor(map_sizes[0]).prod() * roadobj_count)
print("Class frequency")
print(" dynamic objects:", dyn_cf.cpu())
print(" road objects:", road_cf.cpu())
print("object size")
print(" dynamic objects:", dyn_objsize.cpu())
print(" road objects:", road_objsize.cpu())
def dataloader_token_indices(dataloader, class_idxs):
"""
Get token indices of images which match conditions for certain classes
"""
stats_dict = MetricDict()
print("len dataloader:", len(dataloader))
tokens_file = os.path.join(
"/vol/research/sceneEvolution/data/nuscenes/splits", "val_roddick.txt"
)
tokens = src.data.nuscenes_obj_dataset.read_split(tokens_file)
# Make file for selected tokens
# Clear file if anything exists
file = os.path.join(
"/vol/research/sceneEvolution/data/nuscenes/splits",
"val_pedestrians_beyond_35m.txt",
)
open(file, "w").close()
counta = 0
for i, (idxs, image, _, gt_maps, _, _, token) in enumerate(dataloader):
# Move tensors to GPU
gt_maps = gt_maps.cuda()
# Check if small distant objects are beyond 35m only
gt = gt_maps[:, 11].unsqueeze(1)
pixel_dist = int(35 * 4)
# First make sure there are objects over 35m
if gt[:, :, pixel_dist:].sum() > 0:
# Make sure nothing under 35m
if gt[:, :, :pixel_dist].sum() == 0:
# plt.imshow(image[0].permute(1,2,0))
# plt.grid()
# plt.show()
#
# plt.imshow(gt[0,0].cpu())
# plt.show()
# Add token at index
with open(file, "a") as f:
f.write("\n")
f.write(token[0])
counta += 1
if counta % 200 == 0:
print(counta, len(tokens))
def compute_iou(pred, labels):
pred = pred.detach().clone() > 0.5
labels = labels.detach().clone().bool()
intersection = pred * labels
union = pred + labels
# Calc IoU per class
iou_per_class = (intersection.float().sum(dim=-1).sum(dim=-1)) / (
union.float().sum(dim=-1).sum(dim=-1) + 1e-5
)
iou_per_class = iou_per_class.sum(dim=0)
class_count = count_classes(labels)
# Mean IoU
iou_mean = iou_per_class.mean()
iou_dict = {
"iou_per_class": iou_per_class,
"class_count": class_count,
}
return iou_mean, iou_dict
def get_multiscale_iou(epoch_iou, num_classes):
s1_iou_seq = (
(epoch_iou["s1_iou_per_sample"] / (epoch_iou["s1_sample_count"])).cpu().numpy()
)
s2_iou_seq = (
(epoch_iou["s2_iou_per_sample"] / (epoch_iou["s2_sample_count"])).cpu().numpy()
)
s4_iou_seq = (
(epoch_iou["s4_iou_per_sample"] / (epoch_iou["s4_sample_count"])).cpu().numpy()
)
s1_new_iou_seq = s1_iou_seq
s1_new_iou_seq[s1_new_iou_seq != s1_new_iou_seq] = 0
s1_iou_per_sample = s1_new_iou_seq.sum(axis=1) / num_classes
s2_new_iou_seq = s2_iou_seq
s2_new_iou_seq[s2_new_iou_seq != s2_new_iou_seq] = 0
s2_iou_per_sample = s2_new_iou_seq.sum(axis=1) / num_classes
s4_new_iou_seq = s4_iou_seq
s4_new_iou_seq[s4_new_iou_seq != s4_new_iou_seq] = 0
s4_iou_per_sample = s4_new_iou_seq.sum(axis=1) / num_classes
return s1_iou_per_sample, s2_iou_per_sample, s4_iou_per_sample
def compute_iou_per_sample(pred, labels, num_classes):
pred = pred.detach().clone() > 0.5
labels = labels.detach().clone().bool()
intersection = pred * labels
union = pred + labels
# Calc IoU per class
iou_per_class = (intersection.float().sum(dim=-1).sum(dim=-1)) / (
union.float().sum(dim=-1).sum(dim=-1) + 1e-5
)
iou_per_class = iou_per_class
class_count = count_classes_per_sample(labels)
iou_dict = {
"iou_per_sample": iou_per_class,
"sample_count": class_count,
"iou_per_class": iou_per_class.sum(dim=0),
"class_count": class_count.sum(dim=0),
}
iou_per_sample = iou_per_class / class_count
iou_per_sample = torch.sum(iou_per_sample, dim=1) / num_classes
return iou_per_sample, iou_dict
def compute_multiscale_iou(preds, labels, visible_masks, num_classes, threshold=0.5):
multiscale_iou_per_class = []
multiscale_class_count = []
for pred, label, mask in zip(preds, labels, visible_masks):
assert pred.shape == label.shape
assert len(pred.shape) == len(mask.shape)
# Only evaluate in visible areas
pred = torch.sigmoid(pred.detach().clone()) * mask.float()
pred = pred > threshold
label = label.detach().clone() * mask.float()
label = label > 0.5
intersection = pred * label
union = pred + label
# Calc IoU per class
iou_per_class = (intersection.float().sum(dim=-1).sum(dim=-1)) / (
union.float().sum(dim=-1).sum(dim=-1) + 1e-5
)
iou_per_class = iou_per_class
class_count = count_classes_per_sample(label)
# pred_count = count_classes_per_sample(pred)
multiscale_iou_per_class.append(iou_per_class)
multiscale_class_count.append(class_count)
# Create dict
scales = [pred.shape[-1] for pred in preds]
keys_ss = ["iou_per_sample", "sample_count", "iou_per_class", "class_count"]
keys_ms = ["s{}_".format(scale) + key for scale in scales for key in keys_ss]
vals_ms = [
[
ms_iou_per_class,
ms_class_count,
ms_iou_per_class.sum(dim=0),
ms_class_count.sum(dim=0),
]
for ms_iou_per_class, ms_class_count, ms_iou_per_class, ms_class_count in zip(
multiscale_iou_per_class,
multiscale_class_count,
multiscale_iou_per_class,
multiscale_class_count,
)
]
vals_ms = sum(vals_ms, [])
iou_dict = {k: v for k, v in zip(keys_ms, vals_ms)}
iou_per_sample = multiscale_iou_per_class[0] / (multiscale_class_count[0] + 1e-5)
iou_per_sample = torch.sum(iou_per_sample, dim=1) / num_classes
return iou_per_sample, iou_dict
def compute_multiscale_iou_4dims(preds, labels, visible_masks, threshold=0.5):
multiscale_iou_per_class = []
multiscale_class_count = []
for pred, label, mask in zip(preds, labels, visible_masks):
# Only evaluate in visible areas
pred = torch.sigmoid(pred.detach()) * mask.float()
pred = pred > threshold
label = label.detach() * mask.float()
label = label > 0.5
intersection = pred * label
union = pred + label
# Calc IoU per class
iou_per_class = (intersection.float().sum(dim=-1).sum(dim=-1)) / (
union.float().sum(dim=-1).sum(dim=-1) + 1e-5
)
iou_per_class = iou_per_class
class_count = count_classes_per_sample(label)
# pred_count = count_classes_per_sample(pred)
multiscale_iou_per_class.append(iou_per_class)
multiscale_class_count.append(class_count)
# Create dict
scales = [pred.shape[-1] for pred in preds]
keys_ss = ["iou_static_classes", "count_static_classes"]
keys_ms = ["s{}_".format(scale) + key for scale in scales for key in keys_ss]
vals_ms = [
[ms_iou_per_class.sum(dim=0), ms_class_count.sum(dim=0), ]
for ms_iou_per_class, ms_class_count in zip(
multiscale_iou_per_class, multiscale_class_count,
)
]
vals_ms = sum(vals_ms, [])
iou_dict = {k: v for k, v in zip(keys_ms, vals_ms)}
return iou_dict
def compute_multiscale_iou_3dims(preds, labels, visible_masks,
metric="iou_dyn_classes"):
multiscale_iou_per_class = []
print(metric)
for pred, label, mask in zip(preds, labels, visible_masks):
assert (
len(pred.shape) == len(label.shape) == len(mask.shape)
), "IOU masks diff shapes"
# Only evaluate in visible areas
pred = torch.sigmoid(pred.detach()) * mask.float()
pred = pred > 0.5
label = label.detach() * mask.float()
label = label > 0.5
intersection = pred * label
union = pred + label
# Calc IoU per class
iou_per_class = (intersection.float().sum(dim=-1).sum(dim=-1)) / (
union.float().sum(dim=-1).sum(dim=-1) + 1e-5
)
iou_per_class = iou_per_class
multiscale_iou_per_class.append(iou_per_class)
# # Create dict
scales = [pred.shape[-1] for pred in preds]
keys_ss = [metric]
keys_ms = ["s{}_".format(scale) + key for scale in scales for key in keys_ss]
vals_ms = [ms_iou_per_class for ms_iou_per_class in multiscale_iou_per_class]
# vals_ms = sum(vals_ms, [])
iou_dict = {k: v for k, v in zip(keys_ms, vals_ms)}
return iou_dict
def compute_multiband_iou(preds, labels, visible_masks, num_classes, threshold=0.5):
"Compute IoU across the partitioned output"
multiband_iou_per_class = []
multiband_class_count = []
multiband_pred_count = []
multiscale_false_neg = []
multiscale_false_pos = []
multiscale_true_pos = []
# Partition preds, labels and visible masks
n_sections = 50
chunk_size = preds.shape[-2] // n_sections
part_preds = torch.split(preds, split_size_or_sections=chunk_size, dim=-2)
part_labels = torch.split(labels, split_size_or_sections=chunk_size, dim=-2)
part_vis_masks = torch.split(
visible_masks, split_size_or_sections=chunk_size, dim=-2
)
for pred, label, mask in zip(part_preds, part_labels, part_vis_masks):
# Only evaluate in visible areas
pred = torch.sigmoid(pred.detach().clone()) * mask.float()
pred = pred > threshold
label = label.detach().clone() * mask.float()
label = label > 0.5
intersection = pred * label
union = pred + label
# Calc IoU per class
iou_per_class = (intersection.float().sum(dim=-1).sum(dim=-1)) / (
union.float().sum(dim=-1).sum(dim=-1) + 1e-5
)
iou_per_class = iou_per_class
class_count = count_classes_per_sample(label)
pred_count = count_classes_per_sample(pred)
false_neg = (class_count > pred_count).sum(dim=0)
false_pos = (class_count < pred_count).sum(dim=0)
true_pos = (class_count * pred_count).sum(dim=0)
multiband_iou_per_class.append(iou_per_class)
multiband_class_count.append(class_count)
multiband_pred_count.append(pred_count)
multiscale_false_neg.append(false_neg)
multiscale_false_pos.append(false_pos)
multiscale_true_pos.append(true_pos)
# Create dict
bands = torch.arange(n_sections).int() + 1
keys_ss = [
"iou_per_sample",
"sample_count",
"iou_per_class",
"class_count",
"pred_count",
"false_neg",
"false_pos",
"true_pos",
]
keys_ms = ["d{}_".format(scale) + key for scale in bands for key in keys_ss]
vals_ms = [
[
ms_iou_per_class,
ms_class_count,
ms_iou_per_class.sum(dim=0),
ms_class_count.sum(dim=0),
ms_pred_count.sum(dim=0),
ms_false_neg,
ms_false_pos,
ms_true_pos,
]
for
ms_iou_per_class, ms_class_count, ms_iou_per_class, ms_class_count, ms_pred_count, ms_false_neg, ms_false_pos, ms_true_pos
in zip(
multiband_iou_per_class,
multiband_class_count,
multiband_iou_per_class,
multiband_class_count,
multiband_pred_count,
multiscale_false_neg,
multiscale_false_pos,
multiscale_true_pos,
)
]
vals_ms = sum(vals_ms, [])
iou_dict = {k: v for k, v in zip(keys_ms, vals_ms)}
iou_per_sample = multiband_iou_per_class[0] / (multiband_class_count[0] + 1e-5)
iou_per_sample = torch.sum(iou_per_sample, dim=1) / num_classes
return iou_per_sample, iou_dict
def cart2polar_grid(grid2d):
# Convert cartesian grid to polar
r = torch.sqrt(grid2d[..., 0] ** 2 + grid2d[..., 1] ** 2)
theta = torch.atan(grid2d[..., 1] / (grid2d[..., 0] + 1e-9))
# _, r_edges, theta_edges = np.histogram2d(
# r.numpy().reshape(-1), theta.numpy().reshape(-1), bins=[5, 5]
# )
return r, theta
def create_partitioned_polar_grid(grid_h, grid_w, res, nr_bins, ntheta_bins):
grid2d = make_grid2d([grid_h, grid_w], (-grid_w / 2.0, 0.0), res)
r, theta = cart2polar_grid(grid2d)
r_range = [r.min(), r.max()]
theta_range = [theta.min(), theta.max()]
r_step = (r_range[1] - r_range[0]) / nr_bins
r_bins = torch.arange(start=r_range[0], end=r_range[1], step=r_step)
r_bins = torch.cat(
[r_bins[None, :], r_range[1].unsqueeze(dim=0)[None, :]], dim=1
).reshape(-1)
theta_step = (theta_range[1] - theta_range[0]) / ntheta_bins
theta_bins = torch.arange(start=theta_range[0], end=theta_range[1], step=theta_step)
theta_bins = torch.cat(
[theta_bins[None, :], theta_range[1].unsqueeze(dim=0)[None, :]], dim=1
).reshape(-1)
# Partition into polar grid and get indices of each partition
left_r = r_bins[:-1]
right_r = r_bins[1:]
left_theta = theta_bins[:-1]
right_theta = theta_bins[1:]
lb_theta_r = torch.meshgrid(left_r, left_theta)
ub_theta_r = torch.meshgrid(right_r, right_theta)
# Get indices partitioned by polar grid
polar_idxs = [
torch.where(
(
(r >= r_lb).float()
* (r < r_ub).float()
* (theta >= t_lb).float()
* (theta < t_ub).float()
)
== 1
)
for r_lb, r_ub, t_lb, t_ub in zip(
lb_theta_r[0].flatten(),
ub_theta_r[0].flatten(),
lb_theta_r[1].flatten(),
ub_theta_r[1].flatten(),
)
]
#
# for idx_set, set in enumerate(polar_idxs):
# plt.scatter(set[1], set[0])
# plt.show()
return polar_idxs
def compute_binned_polar_iou(preds, labels, vis_masks, num_classes, polar_idxs):
"Compute IoU across a partitioned polar spatial grid"
multiband_iou_per_class = []
multiband_class_count = []
multiband_pred_count = []
multiscale_false_neg = []
multiscale_true_pos = []
threshold = 0.5
# Partition preds, labels and visible masks
n_sections = len(polar_idxs)
# chunk_size = preds.shape[-2] // n_sections
part_preds = [preds[:, :, i[0], i[1]] for i in polar_idxs]
part_labels = [labels[..., i[0], i[1]] for i in polar_idxs]
part_vis_masks = [vis_masks[..., i[0], i[1]] for i in polar_idxs]
for pred, label, mask in zip(part_preds, part_labels, part_vis_masks):
# Only evaluate in visible areas
pred = torch.sigmoid(pred.detach().clone()) * mask.float()
pred = pred > threshold
label = label.detach().clone() * mask.float()
label = label > 0.5
intersection = pred * label
union = pred + label
# Calc IoU per class: [N, n_classes, n_points] ----> [N, n_classes]
iou_per_class = (intersection.float().sum(dim=-1)) / (
union.float().sum(dim=-1) + 1e-5
)
iou_per_class = iou_per_class
class_count = count_classes_per_sample_1D(label)
pred_count = count_classes_per_sample_1D(pred)
false_neg = (class_count > pred_count).sum(dim=0)
true_pos = (class_count * pred_count).sum(dim=0)
multiband_iou_per_class.append(iou_per_class)
multiband_class_count.append(class_count)
multiband_pred_count.append(pred_count)
multiscale_false_neg.append(false_neg)
multiscale_true_pos.append(true_pos)
# Create dict
bands = torch.arange(n_sections).int() + 1
keys_ss = [
"iou_per_sample",
"sample_count",
"iou_per_class",
"class_count",
"pred_count",
"false_neg",
"true_pos",
]
keys_ms = ["d{}_".format(scale) + key for scale in bands for key in keys_ss]
vals_ms = [
[
ms_iou_per_class,
ms_class_count,