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  1. modulome-workflow modulome-workflow Public

    Workflow to download, process, and explore microbial RNA-seq data from NCBI SRA

    HTML 15 19

  2. SBRG/precise-db SBRG/precise-db Public

    A high-fidelity E. coli RNA-seq compendium

    Jupyter Notebook 32 19

  3. SBRG/Protein_ML SBRG/Protein_ML Public

    Machine learning workflows for analyzing high-throughput protein data

    24 11

  4. opencobra/MASS-Toolbox opencobra/MASS-Toolbox Public

    Mass Action Stoichiometric Simulation (MASS) Toolbox

    Mathematica 11 8

  5. SBRG/pymodulon SBRG/pymodulon Public

    Python package for analyzing and visualizing iModulons

    Python 9 11

  6. SBRG/xplatform_ica_paper SBRG/xplatform_ica_paper Public

    Data and code for "Matrix factorization recovers consistent regulatory signals from disparate datasets"

    Jupyter Notebook