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babel-register cache grows infinitely and breaks v8 #5667

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jamietre opened this issue Apr 26, 2017 · 31 comments
Open

babel-register cache grows infinitely and breaks v8 #5667

jamietre opened this issue Apr 26, 2017 · 31 comments

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@jamietre
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jamietre commented Apr 26, 2017

Choose one: is this a bug report or feature request? a bug

Expected Behavior

By default, babel-register creates a cache in the user's home directory, .babel.json. This cache appears to be unmanaged based on looking at ./babel-register/lib/cache.js. The cache should manage itself to avoid growing to an extremely large size.

Current Behavior

I started experiencing v8 crashes when running mocha tests using --compilers js:babel-core/register as below:

<--- Last few GCs --->

   82518 ms: Mark-sweep 807.1 (1039.7) -> 802.3 (1038.7) MB, 149.2 / 0.0 ms [allocation failure] [GC in old space requested].
   82668 ms: Mark-sweep 802.3 (1038.7) -> 802.3 (1036.7) MB, 150.6 / 0.0 ms [allocation failure] [GC in old space requested].
   82838 ms: Mark-sweep 802.3 (1036.7) -> 802.2 (993.7) MB, 169.7 / 0.0 ms [last resort gc].
   82989 ms: Mark-sweep 802.2 (993.7) -> 802.2 (982.7) MB, 150.6 / 0.0 ms [last resort gc].


<--- JS stacktrace --->

==== JS stack trace =========================================

Security context: 0000024EE58CFB61 <JS Object>
    1: SparseJoinWithSeparatorJS(aka SparseJoinWithSeparatorJS) [native array.js:~75] [pc=000002B8298FC057] (this=0000024EE5804381 <undefined>,w=0000011715C4D061 <JS Array[7440]>,F=000003681BBC8B19 <JS Array[7440]>,x=7440,I=0000024EE58B46F1 <JS Function ConvertToString (SharedFunctionInfo 0000024EE5852DC9)>,J=000003681BBC8AD9 <String[4]\: ,\n  >)
    2: DoJoin(aka DoJoin) [native array.js:137...

FATAL ERROR: CALL_AND_RETRY_LAST Allocation failed - JavaScript heap out of memory

I traced these to babel-register/lib/cache.js code calling JSON.stringify on the cache object.

  try {
    serialised = (0, _stringify2.default)(data, null, "  ");
  } catch (err) {

My .cache.json was over 200 megabytes. Deleting it immediately resolved the problem.

Possible Solution

  • cache should periodically expire old things and have a maximum size
  • cache could be implemented using some kind of simple database that's more efficient than reading the entire cache into memory & rewriting it at the end of a session

Context

Prevents inline transpilation from working properly, and performance suffers significantly as the cache size grows and each operation requires reading/writing a huge file.

Because it's very difficult to trace the source of v8 crashes, this is a rather insidious bug. There is at least one other bug report in a random package that is almost certainly this issue:

caolan/async#1311

This would primarily become an issue for people running large test suites using babel-register in a single environment that is never purged (e.g. a dev workstation). I expect even though it may not manifest very often, there are certainly performance and stability implications for a large number of users for never pruning the cache.

Your Environment

Windows 10
Node 6.10.2
Npm 4.2.0
Babel 6.18.2

@babel-bot
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Hey @jamietre! We really appreciate you taking the time to report an issue. The collaborators
on this project attempt to help as many people as possible, but we're a limited number of volunteers,
so it's possible this won't be addressed swiftly.

If you need any help, or just have general Babel or JavaScript questions, we have a vibrant Slack
community that typically always has someone willing to help. You can sign-up here
for an invite.

@pwmckenna
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@jamietre There are definitely a number of issues with the caching as it currently exists. I'm not sure if this is why you're running into this issue, but using babel 6, all projects, run in all environments (NODE_ENV=mocha/development/production) will share a single file. Splitting up the files by environment happened here: #5411, and using a location specific to each project was added here: #5669. These should "solve" the issue in practice (For example at my job we have a ton of modules, some that are very large, and these fixes solved the immediate issue without having to delete .babel.json every so often). These are of course just stopgaps and won't actually completely address the issue. You'll still be able to recreate if you really try.

I get the impression there probably won't be much work on improving the cache in any major way until a decision about how to unify it with the babel-loader caching, and I think there is some desire to standardize around a caching strategy that can be used by other open source libs like ava. Here's some background #5372.

In the short term, here's what we've done at work to stop the bleeding...turns out deleting your .babel.json file every couple days wasn't a satisfactory suggestion for most folks ;)

my-babel-register.js

const env = process.env.BABEL_ENV || process.env.NODE_ENV || 'development';
process.env.BABEL_CACHE_PATH = process.env.BABEL_CACHE_PATH || findCacheDir({ name: 'babel-register', thunk: true })(`${env}.json`);
require('babel-register')({
    ...
});

Then just call this file instead of babel-register.

Good luck!

@xtuc
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xtuc commented May 2, 2017

Seems like the try/catch arround the JSON parse to avoid such issues doesn't work 🤔

@jamietre
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jamietre commented May 2, 2017

In my situation changing caching to per-environment would not likely make much difference: the only environments used are mocha and default, and the mocha environment will end up touching everything, since mocha tests refer directly to the source files of the application itself.

Changing it per-project will probably help, though the reality is that most of the weight comes from a single really big project with a large number of tests. So this might slow the bleeding a bit. But even just with a couple days since I deleted my cache it's back up to 80 megabytes. It only took 200 to break node with default memory limits, and reading/writing 80 megabytes from disk on every test run is a significant performance hit that gets worse as the cache grows.

The goal of a more holistic approach to caching make sense, but since this could clearly be a while to resolve, are you open to considering any other options in the meantime? What about storing metadata only in the memory cache and reading/writing the cache entries as individual files (perhaps arbitrarily grouped into folders to make fs indexing more efficient for large # of files) in the cache directory or something? This would not take much effort to implement and would eliminate the large memory demands for the cache.

A quick google shows a number of caching packages in the ecosystem with some street cred that could be leveraged...

@pwmckenna
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@xtuc Given that the cache was created by a process that had enough memory, I'd be sort of surprised if a cache was ever large enough to cause issues. My guess is the problems occur because loading the cache has to happen before the majority of the process runs, so its possible there just isn't much memory left for the actual execution.

@jamietre I've tried implementing the separate files approach here: #5211, but I couldn't come up with any convincing benchmarks. I ended up scrapping it to do the more obvious improvements like separating sections of cache that would never be used at the same time. I don't think that it would actually help your total memory usage at this point once you've seperated projects/envs. Might help with the long json load time though.

I also had/have a couple PRs that would pave the way for pluging in custom/external caches: #5402 / #5439, though I think I've convinced myself its worth standardizing around something before exposing any cache related apis. I don't really know what goes into a decision like that, but maybe helping on that front would be the way to go.

@jamietre
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jamietre commented May 2, 2017

Given that the cache was created by a process that had enough memory, I'd be sort of surprised if a cache was ever large enough to cause issues

The failure happens with native V8 JSON.stringify which I am guessing has a much different memory use profile than JSON.parse. (Just guessing). That is, it's not the existence of the cache in memory, it's the process of trying to stringify it. But this is real, it's just happening when running mocha tests so apart from GC delays, there shouldn't be any kind of significant memory footprint from the process itself during test runs.

edit actually - i remember that when it came to a head, I discovered while trying to trace the problem that I couldn't even run an empty mocha test or run mocha with a glob that matched nothing. So GC/mocha has nothing to do with it.

I didn't see the results of your benchmarking in that thread, but am interested, however I saw @xtuc comment in #5211

@pwmckenna instead of parsing a big JSON file you want to parse multiple little ones. I don't know if this will increase performance.

The answer to this seems pretty clear -

  1. we are currently reading and writing the entire cache now, for every operation no matter how small, when any given operation only needs to read the things that it's trying to access. By storing the actual cached data in the fs individually, we only have to load the metadata for the cache (e.g. a single key/file ref pair) for each cached entity unless we need it
  2. we have to write everything, every time, instead of things that changed, which most of the time is actually a very small amount of data
  3. When operating with very large entities, and processes aproaching the limit of available memory, there could be other operational overhead related to GC or memory management. And certainly we have seen that node is able to read/parse a file of a certain size, but not stringify it with the same amount of memory.

I'd be extremely surprised you couldn't prove this out with benchmarks. After I blew away my ~200 meg cache, and ran once to rebuild it, my performance improved by about tenfold. When this first started happening I realized I could use --max_old_space_size=xxxx to make it run again, but once it started happening on our build servers I realized I needed a better solution :)

@jamietre
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jamietre commented May 2, 2017

.. actually a good implementation of this would not even require loading metadata at all -- you could just keep the cached data in a path parallel to the input file. The first time you need something, if you don't have it in memory yet, just try to read it from the calculated file path ;) This should in theory completely eliminate startup overhead, and dramatically reduce shutdown overhead of writing changed things.

@pwmckenna
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@jamietre I didn't mean to give the impression I had done a lot of work to profile it. I wouldn't be surprised if you could show significant improvements. I just sort of ran out of stream, and couldn't figure out a general benchmark setup that wasn't super specific to my work environment. I certainly agree with the approach though. Good luck!

@jamietre
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jamietre commented May 3, 2017

Oh - sorry I misunderstood, I thought you meant you had done some profiling and didn't find much benefit!

So what do you think.. is this the kind of thing that would be accepted? I would love to write the code (if some existing community package doesn't already do something similar), if there's some agreement that it's a worthwhile effort and would be merged.

@danielellis
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Thanks for the investigation on this, @jamietre! We also had this issue come up on our build servers. Our solution was to change our automated build to use the BABEL_CACHE_PATH environment variable (https://babeljs.io/docs/usage/babel-register/#environment-variables-babel-cache-path) to point to our build directory instead of a shared user directory.

@hzoo
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hzoo commented Jun 28, 2017

FYI in babel 7, the cache should go in node_modules/.cache now via findCacheDir (as mentioned above) so it would be per directory

@KidkArolis
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This is causing me endless frustration with the multitude of tools still using babel 6.. It takes 60s for require('babel-register') to kick in in any project calling that.

@pwmckenna
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@hzoo My job has given me the rest of the week to upgrade to babel7 and try to improve the caching for our use cases. Outside of just creating benchmarks and actually implementing a faster cache, are there things that we need to keep in mind? I know there was some talk of using the same caching logic as another project (ava or jest or other?). Is there still a desire to share that logic or is it acceptable to have a babel specific implementation? Currently these are the things I'm going to try:

  1. file by file cache instead of one big file.
    I made a pr for this that I eventually closed. Going to start with benchmarks this time so we can see how it performs. Its also not clear that the caching tradeoffs that make sense for our project make sense for everyone so it might make sense to do a custom cache (below)
  2. custom cache implementations.
    I also had a pr that didn't go anywhere to allow for custom caches. Might make sense if we could consume a cache that had the same api as Map? If we did this first I could implement.
  3. use file path as a hint, but use file hash as the source of truth
    We build in a seperate docker container than we deploy to, but they're perfectly compatible. It would be nice to warm the cache, then copy it over. The only hitch so far is that the absolute file paths don't match, but the project relative paths do. (this might be outdated if something has changed since I last looking into babel's caching).

I'd love some feedback on these ideas. We're hoping to get something done and submitted for review by the end of the week. Thanks!

@fde31
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fde31 commented Dec 2, 2019

@pwmckenna I've been running into a similar situation where I'd like to have a somewhat "portable" cache for babel in order to be able to reuse a pre-built cache in multiple environments. Might be an edge-case but I'm wondering if have found a solution to deal with the absolute paths in the cache file? Also I couldn't find your PR for the custom cache. Can somebody point me towards any of that kind of work or any Babel feature / setting that is in-place since then that I might have missed that would allow the cache to be using relative paths in order to become portable? Would like to state I'd happily chime in on helping with this future if there is need.

Thanks

@jedwards1211
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jedwards1211 commented Mar 30, 2020

I would hope it's immediately obvious to anyone that one big fat json file is not a viable long-term strategy for fast startup

@afilp
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afilp commented Apr 22, 2020

Can we safely delete this file?

@Domiii
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Domiii commented Jul 28, 2021

Since the state of the @babel/register cache is not going to get any better any time soon, and our project is largely depending on @babel/register performance, I took the time today to overhaul the caching system. It works well even with hundreds of transformed files, and in my first experiments runtime went from several minutes down to several seconds.

Code

WARNING: This is not a proper fork. I know. Bad. Please see notes below.

How to test it?

The quick-and-dirty approach is to:

  • make sure you have the same version as the one in the package.json
  • open the node_modules/@babel/register/lib folder
  • Replace node.js and cache.js.
  • Run it, test it and leave feedback here.

Of course this is just a hacky, temporary solution. If there is interest, I can put together a patch and even a small patch script.

Some notes

  1. It now saves each file's transform output individually (in a better code-readable format than just json).
  2. Cache directory also contains env (via the undocumented babel.getEnv)
  3. Relative filepath is the same as the original file. This would also make it possible to move cached files between systems (addressing one of @pwmckenna 's concerns).
  4. File also contains cacheKey for validation.
  5. I added some cache miss debugging options. If cache miss is due to different options, it even uses some naive heuristics to make more obivous how they are different. If the team likes it, we can better formalize it, and make it customizable via opts and/or env.

Big warning

I am in a hurry, so I just copy+pasted a mix of original (src) and compiled (lib) source code files, and went of off that. I did not want to work myself through the whole build process, and it was also important that it is available within our project ASAP, thus the bad copy-and-paste decision. This means:

  • no FORK
  • no tests
  • uglified code (due to mix of lib and src code; will need to touch it up a bit before the PR)

However, if someone helps with setting up a FORK and adds tests, and the team agrees with the approach, I am sure we can get the PR out within an hour.

Any feedback is welcome.

@solutionprovider9174
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I tried like above @Domiii
But same speed for starting and for recompiling.

yarn run v1.22.15
$ react-static start
Starting Development Server...
Browserslist: caniuse-lite is outdated. Please run:
npx browserslist@latest --update-db

Why you should do it regularly:
https://github.com/browserslist/browserslist#browsers-data-updating
[@babel/register] Cache miss [FileModified] for "E:\Jincowboy\work\loterra-interface-v2-mobile\wfdalpha-jin\static.config.js" (cached at "E:\Jincowboy\work\loterra-interface-v2-mobile\wfdalpha-jin\node_modules.cache@babel\register\development\static.config.js.babel.js")
Fetching Site Data...
[✓] Site Data Downloaded
Building Routes...
{ has404: true }
[✓] Routes Built
Building Templates...
[✓] Templates Built
Bundling Application...
Fetching Site Data...
[✓] Site Data Downloaded (0.1s)
Running plugins...
Browserslist: caniuse-lite is outdated. Please run:
npx browserslist@latest --update-db

Why you should do it regularly:
https://github.com/browserslist/browserslist#browsers-data-updating
[✓] Application Bundled (43.7s)
[✓] App serving at http://localhost:3000
File changed: \src\pages\Invest_step1.js
Updating bundle...
[✓] Bundle Updated (24.9s)

@Domiii
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Domiii commented Jan 5, 2022

@solutionprovider9174

I tried like above @Domiii But same speed for starting and for recompiling.
...
[@babel/register] Cache miss [FileModified] for "E:\Jincowboy\work\loterra-interface-v2-mobile\wfdalpha-jin\static.config.js" (cached at "E:\Jincowboy\work\loterra-interface-v2-mobile\wfdalpha-jin\node_modules.cache@babel\register\development\static.config.js.babel.js")

As you can see from that verbose message, it found that the file was cached but the original was modified, which requires parsing it again. Caches only provide performance benefits if input files are not changed between two consecutive executions.

@solutionprovider9174
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solutionprovider9174 commented Jan 6, 2022

@Domiii thanks for your reply.
I know that.
But it take 50seconds more for yarn starting and it take 32.8seconds for some space deleting and saving like the following.

yarn run v1.22.15
$ react-static start
Starting Development Server...
Browserslist: caniuse-lite is outdated. Please run:
npx browserslist@latest --update-db

Why you should do it regularly:
https://github.com/browserslist/browserslist#browsers-data-updating
Fetching Site Data...
[✓] Site Data Downloaded
Building Routes...
{ has404: true }
[✓] Routes Built (0.2s)
Building Templates...
[✓] Templates Built
Bundling Application...
Fetching Site Data...
[✓] Site Data Downloaded (0.1s)
Running plugins...
Browserslist: caniuse-lite is outdated. Please run:
npx browserslist@latest --update-db

Why you should do it regularly:
https://github.com/browserslist/browserslist#browsers-data-updating
[✓] Application Bundled (58.8s)
[✓] App serving at http://localhost:3000
File changed: \src\pages\Invest_step1.js
Updating bundle...
[✓] Bundle Updated (32.8s)

How can i fix this issue?
I hope you give me clear way if possible. thank you.

@jlennox
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jlennox commented Feb 23, 2022

My hacky fix for this is to modify node_modules/@babel/register/lib/cache.js:

-    serialised = JSON.stringify(data, null, "  ");
+    serialised = JSON.stringify(data);

When I deleted node_modules/.cache/@babel/register/.babel.7.13.10.development.json

  • then run with JSON.stringify(data, null, " "); the re-created file is 152,577kb.
  • then run with JSON.stringify(data); the re-created file is 109,352kb.

I do not know if it's the reduction in memory size specifically, or if node/v8 has a different code path that is more/less likely to result in issues depending on the added arguments.

If this change can reduce the chance of issues, I do believe it's a good short term fix, because cache does not need to be stored in a human readable format. I've opened PR #14300 to address this.

@liuxingbaoyu
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You can use v8.serialize, which is much more performant.

And can use gzip to compress.

@jlennox
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jlennox commented Apr 19, 2022

If v8.serialize can stream the serialization to a file directly then it would help. Anything that buffers the complete JSON object to memory will still have the issues discussed here.

The issue is memory usage. The cache object, which is indefinitely growing, is turned into JSON in memory to be persisted to disk. Once past a certain size, it exhausts JS's heap space causing a fatal exception.

gzip would likely add to the memory usage since the problematic JSON would still be entirely present in memory.

@liuxingbaoyu
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liuxingbaoyu commented Apr 19, 2022

v8.serialize is implemented using Buffer and does not belong to the heap memory of v8.

When serializing 255mb of text with the --max-old-space-size 300 parameter.

v8.serialize works fine, while JSON.stringify ooms.

255mb cache is big enough, so it's a good short term solution.

Unless we are going to rewrite a caching system soon.

@liuxingbaoyu
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liuxingbaoyu commented Apr 19, 2022

const v8 = require('v8')

console.time("init");
var a = '"'.repeat(Math.pow(2, 28) - 16 - 1);
var b = 'a'.repeat(Math.pow(2, 28) - 16 - 1);
v8.deserialize(v8.serialize(a)); //Force the string to be initialized.
v8.deserialize(v8.serialize(b));
console.timeEnd("init");

global?.gc()
console.log("used_heap_size",v8.getHeapStatistics().used_heap_size/1024/1024);

console.time("v8");
v8.deserialize(v8.serialize(a));
console.timeEnd("v8");

global?.gc()

console.time("JSON");
JSON.parse(JSON.stringify(a));
console.timeEnd("JSON");

global?.gc()

console.time("v8");
v8.deserialize(v8.serialize(b));
console.timeEnd("v8");

global?.gc()

console.time("JSON");
JSON.parse(JSON.stringify(b));
console.timeEnd("JSON");

node --expose_gc main.js

init: 627.644ms
used_heap_size 515.4688186645508
v8: 257.494ms
JSON: 4.113s
v8: 267.619ms
JSON: 1.808s

It looks like the performance boost is amazing!

:)

@Domiii
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Domiii commented Apr 20, 2022

Just to circle back to this:

I can report that my rewrite works very well. Have been using it in Dbux without any problems thus far.

Features

  1. Cache individual files, instead of everything together.
  2. Does not keep giant cache object in memory. Cache and forget. (issue addressed by @jlennox here)
  3. (currently, by default) Reports cache miss with reasons (unless disabled).

Problems that need fixing

  1. Need to actually pull babel and put it in src, rather than just hackfixing the built version (in lib).
  2. Allow configuring logging.
  3. Options should not be serialized using JSON.stringify (in makeCacheKey), since it does not pick up plugin version numbers, and thus does not invalidate the cache when re-running things with different plugin versions.
  4. Probably also missing a cache buster config option.
  5. Use newly discussed v8.serialize instead of JSON.stringify (requires Node@8+).
  6. Proper PR (if you guys think that this is a good approach)

@MiccWan
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MiccWan commented Apr 25, 2022

@liuxingbaoyu

I tried to run your sample code with the value a being a large object instead of a long string. It turns out JSON.strigify has better performance this time.

const v8 = require('v8');

console.time("init");
var l = Math.pow(2, 22) - 16 - 1;
var a = Array.from({ length: l }, () => ({ x: 0 }));
v8.deserialize(v8.serialize(a)); // Force the object to be initialized.
console.timeEnd("init");

global?.gc()
console.log("used_heap_size", v8.getHeapStatistics().used_heap_size / 1024 / 1024);

console.time("v8");
v8.deserialize(v8.serialize(a));
console.timeEnd("v8");

global?.gc()

console.time("JSON");
JSON.parse(JSON.stringify(a));
console.timeEnd("JSON");

node --expose_gc main.js

init: 4.638s
used_heap_size 466.04193115234375
v8: 3.916s
JSON: 1.736s

@liuxingbaoyu
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@MiccWan

Nice test!

Obviously v8 has high performance for large text and low performance for objects.

console.time("init");
var a// = '"'.repeat(Math.pow(2, 28) - 16 - 1);
var b// = 'a'.repeat(Math.pow(2, 28) - 16 - 1);
a = Array.from({ length: 1024 * 1024 }, () => ({ x: 'a'.repeat(128) }));
b = Array.from({ length: 1024 * 128 }, () => ({ x: 'a'.repeat(1024) }));
a = Object.assign({}, a);
b = Object.assign({}, b);
v8.deserialize(v8.serialize(a)); //Force the string to be initialized.
v8.deserialize(v8.serialize(b));
console.timeEnd("init");
v8: 2.318s
JSON: 1.867s
v8: 432.159ms
JSON: 782.384ms

@jlennox
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jlennox commented Apr 26, 2022

The benchmarking should be done on an actual 100mb or larger cache file. Any synthetic dataset depends on assumptions. I can't provide a sample cache file because it's for a close source program.

@Domiii
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Domiii commented Apr 27, 2022

Can the new solution please store results file-by-file, rather than everything in one big blob?

E.g. using some simple magic like this (it works):

function makeCacheFilename(opts) {
  const srcFilename = opts.filename;
  if (!isSubPathOf(srcFilename, cacheRoot)) {
    // eslint-disable-next-line max-len
    console.warn(`[@babel/register] Could not cache results for file "${srcFilename}" because it is outside of sourceRoot ${cacheRoot}. Please set accurate "sourceRoot" in your babel config manually.`);
    return null;
  }

  const relativePath = path.relative(cacheRoot, srcFilename);
  return path.resolve(cacheDir, getEnvName(), relativePath) + '.babel.json'; // (can also store in *.js format, to make it more readable)
}

(PS: it would probably be also a good idea to not cache very small input sizes at all? But, then again, the speed tradeoff (cache vs. transform again) depends on the complexity of the plugins involved.)

@Domiii
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Domiii commented Apr 28, 2022

The benchmarking should be done on an actual 100mb or larger cache file. Any synthetic dataset depends on assumptions. I can't provide a sample cache file because it's for a close source program.

@jlennox On average, having a cache file as large as 100mb is unrealistic, if you cache files individually. Sure, some libraries might have several MB in a single file, but that's the exception, especially since most of the files in node_modules don't get (or should not get) babel'ed.

My points:

  • Please cache files individually (as pointed out in several of my replies above). I don't quite understand why that does not even seem to be a consideration or why it is not worth acknowledgement?
  • If you cache files individually, 100MB is certainly a good worst case scenario. At the same time, 10kb to 100kb might be a better optimization target.

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