Data and code for "Respiratory disease contact patterns in the US are stable but heterogeneous"

This repository provides the data and source code for the following study: Juliana C Taube, Zachary Susswein, Vittoria Colizza, Shweta Bansal. "Respiratory disease contact patterns in the US are stable but heterogeneous." https://doi.org/10.1101/2024.04.26.24306450

Estimates

Pandemic and baseline estimates of contact at the county-week scale are provided. Estimates are also provided dis-aggregated by age, gender, race/ethnicity, and setting of contact.

Columns of interest:

• contact_fit has modeled pandemic estimates of mean contact
• non_hh_contacts has observed pandemic mean contact
• scale_baseline has inferred baseline estimates of mean contact