Releases: baryshnikova-lab/safe-java
Releases · baryshnikova-lab/safe-java
1.0 Beta 7
- Updated UI text for clarity and brevity.
- Added domain report when exporting results from Step 4.
- Added interpretation guidelines to neighborhood report.
- Added visual indicator for when network visualization is being recomputed in Steps 2/4.
1.0 Beta 6
- Changed color scheme to red-blue (high-low).
- Changed "annotation" to "attribute".
- Added ability to export enrichment scores in Step 2.
- Added ability to filter attribute/domain tables in Steps 2/4 based on current node selection.
- Added support for remembering the last directory browsed when picking an attribute file.
- Fixed bug where user can attempt to compute enrichment when no attribute file is selected.
- Fixed bug where table columns are laid out incorrectly in Cytoscape 3.4.
1.0 Beta 5
- First attribute is now pre-selected when building the enrichment landscape
- Added color legend for Step 2 enrichment
- Fixed bug where annotation files without a header are handled incorrectly
- Fixed bug where enrichment visualization is recompute unnecessarily
1.0 Beta 4
- Initial Cytoscape App Store release
- Added "Examples" link to Step 1 to direct users towards project wiki and sample data
1.0 Beta 3
- Fixed issue where edge weights are being processed even though a non-edge-weight-based distance metric is selected
- Fixed issue where app crashes when attempting to build a composite map when no attributes are significantly enriched
- Fixed issue where numeric non-double edge weights causes app to crash