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Samplesheet input mode #4

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dfornika opened this issue Dec 7, 2021 · 0 comments · Fixed by #9
Closed

Samplesheet input mode #4

dfornika opened this issue Dec 7, 2021 · 0 comments · Fixed by #9

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@dfornika
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dfornika commented Dec 7, 2021

Add feature to allow input via a samplesheet with the following fields:

If only reads are supplied:
ID,R1,R2,ASSEMBLY

If running in --pre_assembled mode, with assemblies:
ID,R1,R2,ASSEMBLY
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Add samplesheet input mode BCCDC-PHL/plasmid-screen
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@dfornika