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WS77111-chloroplast.dr
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WS77111-chloroplast.dr
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Discrepancy Report Results
Summary
COUNT_NUCLEOTIDES: 1 nucleotide Bioseq is present
SOURCE_QUALS: isolate (all present, all unique)
SOURCE_QUALS: taxname (all present, all unique)
SOURCE_QUALS: taxid (all present, all unique)
SOURCE_QUALS: location (all present, all unique)
FEATURE_COUNT: CDS: 74 present
FEATURE_COUNT: gene: 114 present
FEATURE_COUNT: mRNA: 74 present
FEATURE_COUNT: rRNA: 4 present
FEATURE_COUNT: tRNA: 36 present
SUSPECT_PRODUCT_NAMES: 2 product_names contain suspect phrases or characters
May contain database identifier more appropriate in note; remove from product name
2 features contains three or more numbers together that may be identifiers more appropriate in note
INCONSISTENT_STRUCTURED_COMMENTS: Structured Comment Report (all present, all same)
ALL_SEQS_CIRCULAR: All (1) sequences are circular
Detailed Report
COUNT_NUCLEOTIDES: 1 nucleotide Bioseq is present
WS77111-chloroplast.fa:WS77111cp (length 123421)
SOURCE_QUALS: isolate (all present, all unique)
SOURCE_QUALS: taxname (all present, all unique)
SOURCE_QUALS: taxid (all present, all unique)
SOURCE_QUALS: location (all present, all unique)
FEATURE_COUNT: CDS: 74 present
FEATURE_COUNT: gene: 114 present
FEATURE_COUNT: mRNA: 74 present
FEATURE_COUNT: rRNA: 4 present
FEATURE_COUNT: tRNA: 36 present
SUSPECT_PRODUCT_NAMES: 2 product_names contain suspect phrases or characters
SUSPECT_PRODUCT_NAMES: May contain database identifier more appropriate in note; remove from product name
SUSPECT_PRODUCT_NAMES: 2 features contains three or more numbers together that may be identifiers more appropriate in note
WS77111-chloroplast.fa:CDS photosystem I P700 apoprotein A1 lcl|WS77111cp:75131-77383 DB47CP_000082
WS77111-chloroplast.fa:CDS photosystem I P700 apoprotein A2 lcl|WS77111cp:77409-79613 DB47CP_000083
INCONSISTENT_STRUCTURED_COMMENTS: Structured Comment Report (all present, all same)
INCONSISTENT_STRUCTURED_COMMENTS: structured comment field Assembly Method (all present, all same)
INCONSISTENT_STRUCTURED_COMMENTS: All Genome-Assembly-Data structured comment has field structured comment field Assembly Method value 'ABySS v. 2.1.0; LINKS v. 1.8.5'
WS77111-chloroplast.fa:WS77111cp:StructuredComment
INCONSISTENT_STRUCTURED_COMMENTS: structured comment field Genome Coverage (all present, all same)
INCONSISTENT_STRUCTURED_COMMENTS: All Genome-Assembly-Data structured comment has field structured comment field Genome Coverage value '43x'
WS77111-chloroplast.fa:WS77111cp:StructuredComment
INCONSISTENT_STRUCTURED_COMMENTS: structured comment field Sequencing Technology (all present, all same)
INCONSISTENT_STRUCTURED_COMMENTS: All Genome-Assembly-Data structured comment has field structured comment field Sequencing Technology value 'Illumina HiSeq'
WS77111-chloroplast.fa:WS77111cp:StructuredComment
ALL_SEQS_CIRCULAR: All (1) sequences are circular