Merge 523d48e into 2c1ca56

bendalab · Nov 9, 2018 · 3e5e8ad · 3e5e8ad
2 parents 2c1ca56 + 523d48e
commit 3e5e8ad
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Showing 7 changed files with 763 additions and 265 deletions.
diff --git a/thunderfish/bestwindow.py b/thunderfish/bestwindow.py
diff --git a/thunderfish/checkpulse.py b/thunderfish/checkpulse.py
@@ -28,7 +28,7 @@
     pass
 
 
-def check_pulse_width(data, samplerate, th_factor=2.0, percentile=25.0,
+def check_pulse_width(data, samplerate, th_factor=0.8, percentile=1.0,
                       pulse_thresh=0.1, verbose=0, plot_data_func=None, **kwargs):
     """Detects if a fish is pulse- or wave-type based on the proportion of the time distance
     between a peak and its following trough, relative to the time between consecutive peaks.
@@ -339,7 +339,7 @@ def plot_psd_proportion(freqs, power, proportions, percentiles, pulse_fish,
     ax.set_ylabel('Power [dB]', fontsize=fs)
 
 
-def add_check_pulse_width_config(cfg, th_factor=2.0, percentile=25.0, pulse_thresh=0.1):
+def add_check_pulse_width_config(cfg, th_factor=0.8, percentile=1.0, pulse_thresh=0.1):
     """ Add parameter needed for check_pulse_width() as
     a new section to a configuration.