Different number node and edge

[danhtrancao]

Hi,
I'm facing the problems about number of nodes and edges, I have 7 nodes but just have 6 edges. I'm facing the error: joblib.externals.loky.process_executor._RemoteTraceback: self.do_recursions(). How to implement graph2vec?

[benedekrozemberczki]

You need a list of graphs. What is your exact ML problem?

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On Fri, 18 Dec 2020 at 12:37, danhtrancao ***@***.***> wrote: I have 7 nodes but just have 6 edges. I'm facing the error: joblib.externals.loky.process_executor._RemoteTraceback: self.do_recursions(). How to implement graph2vec? — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub <#30>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AEETMF3GZX5H5ONHP5N33LLSVNEKNANCNFSM4VBD34KA> .

[benedekrozemberczki]

Did you read the Graph2Vec paper? On Fri, 18 Dec 2020 at 12:53, Benedek Rozemberczki < benedek.rozemberczki@gmail.com> wrote:

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You need a list of graphs. What is your exact ML problem? On Fri, 18 Dec 2020 at 12:37, danhtrancao ***@***.***> wrote: > I have 7 nodes but just have 6 edges. I'm facing the error: > joblib.externals.loky.process_executor._RemoteTraceback: > self.do_recursions(). How to implement graph2vec? > > — > You are receiving this because you are subscribed to this thread. > Reply to this email directly, view it on GitHub > <#30>, or > unsubscribe > <https://github.com/notifications/unsubscribe-auth/AEETMF3GZX5H5ONHP5N33LLSVNEKNANCNFSM4VBD34KA> > . >

[danhtrancao]

I have already read it and run source with only file json and successful generation the csv file. I changed the dataset in json file by my dataset with {"edges": [[0, 1], [0, 2], [1, 3], [1, 4], [2, 5], [2, 6]], "features": {"0": "1", "1": "1", "2": "3", "3": "3", "4": "3", "5": "3"}}. It seems not correct between number of edges and nodes so the error message appear. I count the number of nodes is 7 and edges is 6. I think this is cause error.

[danhtrancao]

I got the idea, thanks!

[benedekrozemberczki]

Your problem is that you have 7 nodes (0,1,2,3,4,5,6) and the node feature dictionary has 6 entries.