Remove Hmp and Extreme precomputed error models

Unnecessary and redundant. `tperr1` and those computed from the Balanced community remain.
benjjneb · Apr 11, 2019 · e652624 · e652624
1 parent 57f82f4
commit e652624
Show file tree

Hide file tree

Showing 5 changed files with 0 additions and 36 deletions.
diff --git a/R/errorModels.R b/R/errorModels.R
@@ -508,39 +508,3 @@ NULL
 #'  
 #' @name errHmpF
 NULL
-
-#' An empirical error matrix.
-#'
-#' A dataset containing the error matrix estimated by DADA2 from the reverse reads of the
-#' Illumina Miseq 2x250 sequenced HMP mock community (see manuscript).
-#'
-#' @format A numerical matrix with 16 rows and 41 columns.
-#'  Rows correspond to the 16 transition (eg. A2A, A2C, ...)
-#'  Columns correspond to consensus quality scores 0 to 40.
-#'  
-#' @name errHmpR
-NULL
-
-#' An empirical error matrix.
-#'
-#' A dataset containing the error matrix estimated by DADA2 from the forward reads of the
-#' Illumina Miseq 2x250 sequenced Extreme mock community (see manuscript).
-#'
-#' @format A numerical matrix with 16 rows and 41 columns.
-#'  Rows correspond to the 16 transition (eg. A2A, A2C, ...)
-#'  Columns correspond to consensus quality scores 0 to 40.
-#'  
-#' @name errExtremeF
-NULL
-
-#' An empirical error matrix.
-#'
-#' A dataset containing the error matrix estimated by DADA2 from the reverse reads of the
-#' Illumina Miseq 2x250 sequenced Extreme mock community (see manuscript).
-#'
-#' @format A numerical matrix with 16 rows and 41 columns.
-#'  Rows correspond to the 16 transition (eg. A2A, A2C, ...)
-#'  Columns correspond to consensus quality scores 0 to 40.
-#'  
-#' @name errExtremeR
-NULL
diff --git a/data/errExtremeF.rda b/data/errExtremeF.rda
diff --git a/data/errExtremeR.rda b/data/errExtremeR.rda
diff --git a/data/errHmpF.rda b/data/errHmpF.rda
diff --git a/data/errHmpR.rda b/data/errHmpR.rda