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Description

Anapath Core is a package containing libraries for managing standard file formats (BED, fasta, gff, gtf, MAF, newick, VCF, ...) and objects from NGS.

Installation

From PyPI

pip install anacore

From sources

1- Download sources

  • [user way] Downloads the latest released release from https://github.com/bialimed/anacore/releases.
  • [developper way] Clones the repository from the latest unreleased version: git clone https://github.com/bialimed/AnaCore.git.

2- Install

python setup.py install --user

Documentation

See doc/index.html

Copyright

2017 Laboratoire d'Anatomo-Cytopathologie de l'Institut Universitaire du Cancer Toulouse - Oncopole

Contact

escudie.frederic@iuct-oncopole.fr

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Libraries for managing standard file formats and objects from NGS

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