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WIP: Add Freesurfer 7 #67

Merged
merged 35 commits into from
Aug 30, 2023
Merged

WIP: Add Freesurfer 7 #67

merged 35 commits into from
Aug 30, 2023

Commits on Jul 10, 2020

  1. make freesurfer 7 docker file

    @Shotgunosine
    Shotgunosine committed Jul 10, 2020
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Commits on Oct 27, 2020

  1. bump to FS 7.1.1

    Andy Worth committed Oct 27, 2020
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Commits on Nov 2, 2020

  1. Merge pull request #1 from AndysWorth/fs_7 

    ENH: bump to FS 7.1.1
    @Shotgunosine
    Shotgunosine committed Nov 2, 2020
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Commits on Nov 3, 2020

  1. add 7.1.1

    @Shotgunosine
    Shotgunosine committed Nov 3, 2020
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  2. fix circleci config

    @Shotgunosine
    Shotgunosine committed Nov 3, 2020
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  3. have fs_7 tests use fs_7 image

    @Shotgunosine
    Shotgunosine committed Nov 3, 2020
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  4. fix don't use python2 prefix to group commands if we're running frees… 

    …urfer 7
    @Shotgunosine
    Shotgunosine committed Nov 3, 2020
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Commits on Aug 25, 2023

  1. bump neurodocker to master and freesurfer to 7.4.1

    @Shotgunosine
    Shotgunosine committed Aug 25, 2023
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  2. ubunto to jammy

    @Shotgunosine
    Shotgunosine committed Aug 25, 2023
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  3. merge master

    @Shotgunosine
    Shotgunosine committed Aug 25, 2023
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  4. [pre-commit.ci] auto fixes from pre-commit.com hooks 

    for more information, see https://pre-commit.ci
    @pre-commit-ci
    pre-commit-ci[bot] committed Aug 25, 2023
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  5. reformat docker calls in test_fs7

    @Shotgunosine
    Shotgunosine committed Aug 25, 2023
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  6. [pre-commit.ci] auto fixes from pre-commit.com hooks 

    for more information, see https://pre-commit.ci
    @pre-commit-ci
    pre-commit-ci[bot] committed Aug 25, 2023
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  7. update recipes

    @Remi-Gau
    Remi-Gau committed Aug 25, 2023
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  8. refactor

    @Remi-Gau
    Remi-Gau committed Aug 25, 2023
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  9. refactor

    @Remi-Gau
    Remi-Gau committed Aug 25, 2023
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  10. refactor

    @Remi-Gau
    Remi-Gau committed Aug 25, 2023
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Commits on Aug 28, 2023

  1. refactor bash script

    @Shotgunosine
    Shotgunosine committed Aug 28, 2023
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Commits on Aug 29, 2023

  1. use mamba, bumb bids-validator version

    @Shotgunosine
    Shotgunosine committed Aug 29, 2023
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  2. [pre-commit.ci] auto fixes from pre-commit.com hooks 

    for more information, see https://pre-commit.ci
    @pre-commit-ci
    pre-commit-ci[bot] committed Aug 29, 2023
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  3. update neurodocker

    @Shotgunosine
    Shotgunosine committed Aug 29, 2023
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  4. parameterize license directory to avoide cache collision

    @Shotgunosine
    Shotgunosine committed Aug 29, 2023
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  5. change entrypoint to python

    @Shotgunosine
    Shotgunosine committed Aug 29, 2023
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  6. update versions in readme

    @Shotgunosine
    Shotgunosine committed Aug 29, 2023
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  7. deal with license

    @Shotgunosine
    Shotgunosine committed Aug 29, 2023
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  8. Update .circleci/config.yml

    @Remi-Gau
    Remi-Gau committed Aug 29, 2023
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  9. bump node to 18.x

    @Shotgunosine
    Shotgunosine committed Aug 29, 2023
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  10. trigger circle?

    @Shotgunosine
    Shotgunosine committed Aug 29, 2023
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  11. add python2 for fs6 and fix installation directory for fs7

    @Shotgunosine
    Shotgunosine committed Aug 29, 2023
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Commits on Aug 30, 2023

  1. fix fs7 install dir

    @Shotgunosine
    Shotgunosine committed Aug 30, 2023
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  2. parameterize job names

    @Shotgunosine
    Shotgunosine committed Aug 30, 2023
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  3. paramterize job dependencies

    @Shotgunosine
    Shotgunosine committed Aug 30, 2023
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  4. pin pandas as 1.5.3

    @Shotgunosine
    Shotgunosine committed Aug 30, 2023
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  5. rm Dockerfile

    @Remi-Gau
    Remi-Gau committed Aug 30, 2023
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  6. it is always a path issue

    @Remi-Gau
    Remi-Gau committed Aug 30, 2023
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