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We should create a database for all the msgf+ jobs #367

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ypriverol opened this issue Apr 8, 2024 · 1 comment · Fixed by #374
Closed

We should create a database for all the msgf+ jobs #367

ypriverol opened this issue Apr 8, 2024 · 1 comment · Fixed by #374
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enhancement New feature or request

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@ypriverol
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Description of feature

Originally reported by @jpfeuffer

Description of feature
E.g. for MSGF+ we can first create the index for the database and then pass it to every ID step. Might need some customization in the OpenMS adapters.

This will decrease a lot the time for msgf+ compute.

@ypriverol ypriverol added the enhancement New feature or request label Apr 8, 2024
@ypriverol
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@daichengxin in the next PR, would be nice to include this feature. Every time msgf+ is used, it would be relevant to save space and time/cpu resources to have only one job before all the msgf+ that creates the database for all the msgf+ and it passed to all processes.

@daichengxin daichengxin linked a pull request May 15, 2024 that will close this issue
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