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Contigs mode is not returning AMPs #20

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celiosantosjr opened this issue May 1, 2020 · 1 comment
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Contigs mode is not returning AMPs #20

celiosantosjr opened this issue May 1, 2020 · 1 comment
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@luispedro @celiosantosjr
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@celiosantosjr
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It seems that the methionine excision, when N-terminal is not working when macrel is called by this module. This can be affecting the prediction. Also, the option --keep-negatives seems to be default when calling this mode.
@celiosantosjr celiosantosjr added the bug Something isn't working label May 1, 2020
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Is there an example that can be posted publicly?

The test at https://github.com/BigDataBiology/macrel/tree/master/tests/contigs should test for these behaviours

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